Bifidobacterium breve JCM 7019: B7019_1774
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Entry
B7019_1774 CDS
T03121
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrc03016
]
B7019_1774
Enzymes [BR:
bbrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B7019_1774
Transfer RNA biogenesis [BR:
bbrc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B7019_1774
Prokaryotic type
B7019_1774
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHJ19940
LinkDB
All DBs
Position
complement(1948196..1949383)
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AA seq
395 aa
AA seq
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MPKAWIKGTPHMPQTTPSGLLVIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGA
LVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEVRSRWLELSSQLTE
GGHSEEPSSLPASSWQQLLTRTIAANFTGDIEQIPNTFSAIKINGQRAYDLAREGKDVEL
KPRPVTISEFTVLAIRSGFVTGKQSDEALQERGMVSVLDVDVRVSCSSGTYIRALARDLG
DKLGVGGYLTRLRRIRVGNFALPDDTSGLLSPDAVSETQPHTITAHTEQKTFTNREGETI
TRNKCVLDTPEGLDGAGRCAWLIGRSLTMEQAARSAMPALDITPEEAAELRFGRRIERTI
HEPAAAIVPQTHDVVAIIERANGHQAKPITVFPLA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggcatggataaagggaacaccgcatatgcctcaaacaactccaagcggcctg
ctcgtcatcgacaagccgcaaggcgtgaccagtttcgatgcagtggccgccgtgcgcggc
gcgttgcatatcaagaaagtcggtcacgccggcacacttgatccgatggccaccggagcg
ttggtcatcgcattcggccatgccacgcgtctgctcaatgccatcgttgcacatgataaa
acctatgaggctaccattcgtctcggcttgcgcaccaccaccgacgatgccgaaggcgag
gtgcttgtcgatgacgaagtccgctcccgctggctggagctgtcgtcgcagctgactgaa
ggtggtcatagcgaggaaccatcatcattgccagcctcctcgtggcagcagctactcact
cgcactatcgccgccaacttcaccggcgatatcgagcaaattcccaacactttttccgcc
atcaaaatcaatggtcagcgggcttatgacttggcccgcgaaggcaaggatgtggagctt
aagccacgtccggtcactatcagcgaattcactgtgctggctattcgcagtggattcgtg
acggggaaacagtctgatgaagcgttgcaagagcgcggaatggtttcagtattggacgtc
gatgtacgcgtcagctgctcgtcgggtacgtatattcgcgcattggcccgtgacttgggc
gacaagttgggtgtcggtggttatctgacccgtttgcgccgcatcagagtcggcaacttc
gccctgccggacgacaccagcgggcttctttcgcctgatgcggtgagcgagacgcagccc
catacgatcacggctcataccgagcagaaaacgtttaccaatcgcgaaggcgaaaccatc
actcgcaataagtgcgtgctcgacaccccggaagggcttgacggcgctggtcgatgcgca
tggctgattggtcgctcattgaccatggaacaggccgcccgcagcgccatgcccgctctt
gacatcacgccggaggaagctgcggagctgcgttttgggcgtcgcatcgagcgcacgatt
catgagcctgccgccgccatcgtgccgcaaacccatgatgtggtggccatcatcgagagg
gcgaatggccatcaggccaagccgatcaccgtattccccctcgcgtaa
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