Bifidobacterium breve JCM 7019: B7019_1922
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Entry
B7019_1922 CDS
T03121
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc00300
Lysine biosynthesis
bbrc00470
D-Amino acid metabolism
bbrc01100
Metabolic pathways
bbrc01110
Biosynthesis of secondary metabolites
bbrc01120
Microbial metabolism in diverse environments
bbrc01230
Biosynthesis of amino acids
Module
bbrc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B7019_1922
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B7019_1922
Enzymes [BR:
bbrc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B7019_1922
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHJ20086
LinkDB
All DBs
Position
complement(2115233..2116855)
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AA seq
540 aa
AA seq
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MPISPIWPAATAVNANGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRAAAEAF
NTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
DEIALAIEQGFAKIVVDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHED
QKFGVPLLAAGADAAVLDVLNNLTDVTPAATNARIAESDVNAGNDHPQSTTPIAPASGSG
KPARELRYDVKYPYDLSHEEVSDTDKVLAAAMEAIADGPSIAVLKTILANQDVLELVGAH
SHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDSMDIDVE
LTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSAGNPI
DERVYVSVDGGMSDNIRPALYGADYTARLANRTGSTETMLARVCGMHCESGDIVVHEVRL
PADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDDLLDLDQS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttctccaatttggccggccgccacggccgtgaatgccaatggtgccattgca
tttcatggccgcaccgccgaatccctgttggacgagtttggctcgccgctttacctcatc
gataccgatgaggtatcggcccgtgccaagcacttcgtacgcgctgcagccgaggcattc
aacacctccaccacgcacgtgagctttgccggcaaggcgttcctgtccaaggaaatcgtg
cgactggtcgccgaggctggcatgtttgtggacacctgcacgatgggggagatgcgaatc
gccctcgctgccggtgtgcccggccgccgcctagtgctgcatggcaacaacaagtccgat
gatgaaatcgcgctggccatcgaacagggcttcgccaaaatcgtggtcgatgagcctaat
gagccggagcgcatcgccgccatcgcccgtaaactcggcaagcgtgcccgcgtgatgctg
cgtgtcactgtcggcgtgcatgccggtggtcacgaatacatctccaccgctcacgaggat
cagaagttcggcgtcccgctgctggcggccggagccgacgccgcagtgctcgacgtgctg
aacaacctgacggacgtgacacctgccgcgaccaacgcgcgtattgcggagtcggacgtt
aatgctggcaatgaccaccctcagtcaactacgccgatagctcccgccagcgggagcggc
aaaccggcacgcgaactgcgttatgacgtcaagtatccgtacgacctgagccacgaggaa
gtctccgatacggataaggtacttgccgccgctatggaagccatcgcagatggtccgtcc
attgccgtgctcaagaccatcctggccaatcaggatgtgctggaactggtcggtgctcac
tcgcatatcggctccaacatccacgacgcggatgccttcatccacgccgccaagcgcatg
atgctgctgcgcaagaccctgtgggccaccgacgcctacatcctgcccgaaatcgatctc
ggcggtggttactccgtggcctacaccgacggcgaagattccatggacatcgatgtggag
ctcactcgtctggccggctcggtcagcgacacaaaccgtgctctgggcatgcccgccccg
gccatcagcttcgagcccggccgttacatcgtggctccagccggcgtgaccctgtatcgt
gtaggcaccatcaagcatgtgcacctgagcgatgccaaagacagtgccggcaacccgatt
gacgagcgtgtgtatgtgtctgtggatggcggcatgtccgacaatatccgtccggcactg
tacggagccgattacaccgcacgtttggccaaccgaaccggctctactgagacgatgctt
gcccgcgtgtgcggtatgcattgcgaatccggcgacatcgtggtccatgaggtgcgtttg
cctgctgatctcaagcgcggagacattcttgccgtgccggtcaccggtgcatacggccgc
acgatggccagcaactataaccaagcgttgattccggccgtggtcgccgtgtctgagcag
ggcgcacatgttatgttgcgccgccagaccatcgatgacctgctggacttggatcaaagc
tga
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