Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0126
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Entry
BBBR_0126 CDS
T04525
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03030
DNA replication
bbrd03430
Mismatch repair
bbrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBBR_0126
03430 Mismatch repair
BBBR_0126
03440 Homologous recombination
BBBR_0126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrd03032
]
BBBR_0126
03400 DNA repair and recombination proteins [BR:
bbrd03400
]
BBBR_0126
Enzymes [BR:
bbrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBBR_0126
DNA replication proteins [BR:
bbrd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBBR_0126
DNA repair and recombination proteins [BR:
bbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBBR_0126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAQ99164
LinkDB
All DBs
Position
174835..177489
Genome browser
AA seq
884 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGRLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICEKESIKPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAIDAVIDHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDRAESVLSDTAEAEDMDDLHRQAKALGLSALTAIADIINTTLGAMTGAISPRMRLELLA
ARLLAGSENGFVAPAAAPALGAPASATGAVASAAPAAGGAAGGFAGASRGGFVGASHGGF
AGAARNQAQTQTAPAAAAPAAPASPATNAAAPSSDSRSIDEKWNAAVTALPQAIREYVTR
DKVPTVAFGPNRKGLPCLSMTFDKPLSQHAFALAVDNSGKKAAIVVMDAVRQEFGADAVI
APASVAANGERVESVKRLSPEQLAKVKQQIAMAKAGLAASSLGAGLGMHSGSEPKAQKPA
AEGNAEDADGSHRASGVTPGGTSNKPDLDDDDPWAKPAASSEAVVEPSASAGEPSVDGFA
PSNPDPASAQAPEEHHKKHVAVPDMSDDVDPWATPAAPVAHAQDATANTQAGQAEQFTAS
TSSNVGAPAADSAASTASADPWNQPVPPPAEPMGGPWNQPAASAPQAAPDPWNQPAPPQS
EPDPWNQPQGQAQRQTPSQSQGMPQSQNSGAADPWNQPMPPSPQPQVAAEDDEYSMSDQS
LGDATAMKMDDLKKLFEVKKVEEFAADDPKNPKNIQPAKKHTDD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtcgctatcgtccggacacctttgaaggtgtgatcggccag
gaccaggtcacggttcctctgatgcgagcccttgacgagggcaggctcacgcatgcctat
ttgttctccggcccgcgaggctgcggcaagaccagttccgcgcgtatcctggcccgttgc
gtcaactgcgccaagggcccaacctcgcatccgtgcggcgagtgtgaaagctgcaaggat
ctggccaccggaggcccgggatccatcgatgtggtcgaaatcgatgccgcctcacacaac
ggtgtggacgatgcccgcgaattgcgcgaacgcgccgggttcgcccccgcccgcgaccgc
tacaagattttcatcctcgacgaggctcacatggtcacgcagcagggcttcaacgcgctg
ctcaagatcgttgaggaaccgcccgagcatgtgatgttcatcttcgccaccaccgaaccg
gacaaggtgattggcaccatccgttcgcgtacccatcattacccgttccgtctggtgccg
caggaggtcatgggcccctatctggaaacgatctgcgagaaagagagcatcaagcctgag
cccggcgtgctgaaactcgcgatgcgtgccggcggcggctccatgcgagacaccctgtcc
gtgttggaccagctcatggtcggttccgtcgagggcgtcatcacccatgatgccgccgtg
gctctgcttggtttcactcctgaagcgttgatcggtgaggccatcgatgcggtcatcgat
cataacggcgaggccctgtacggcgtgatccagaaggtcgtggtcggcgggttcgaccca
cgacgattcgtggaggatctgctggcccgcgtgcgtgacctgctggtgctgactttggcg
ggcgaccgcgcggaatccgtgctgtcagacacggccgaggccgaggacatggacgacctg
caccgccaggccaaggcccttggactgagcgcgctcaccgccattgcggatatcatcaac
accacgctgggtgccatgaccggtgccatctctccgcgtatgcgactcgaattgctggcg
gcccgactgctggccggcagcgaaaacgggttcgttgcacccgctgccgctcccgcattg
ggagctcccgcgtcagccacaggagctgtagcctctgccgctcccgctgcgggaggtgca
gcaggtggttttgccggcgcatctcgtggcggtttcgtcggggcctcacacggtggattc
gccggcgctgcacgaaatcaagcacagacgcagaccgcgcccgcagccgccgcccctgct
gcgcctgcatctcctgctacgaatgctgcggctccaagctccgactcccgatccattgat
gaaaagtggaatgcagccgttacagcattgccgcaggccatccgcgaatacgtcaccaga
gacaaggtgccgacggtggcattcggccccaaccgtaagggattgccctgcctgtccatg
accttcgacaagccgctcagccagcatgcgtttgcgctcgcggtggataacagcggcaaa
aaggccgcaatcgtggtgatggatgccgtacgccaggaattcggtgccgatgcggttatc
gctcctgcgtccgttgcagccaacggtgagcgagtggaatccgtcaagcgcctgagcccc
gaacagttggccaaggtcaagcagcagattgcgatggccaaggcgggtctggccgcttcg
agtctgggagctggcctgggcatgcattccggcagtgagccaaaagctcagaagccggct
gctgaggggaacgccgaagatgcggatggcagccaccgtgcctctggcgtaacgccggga
ggcacttcgaacaagcccgatttggatgatgacgatccatgggccaaacctgccgcatcg
tctgaggctgtggtcgagccatctgcgtctgcaggtgagccgtctgttgatggttttgct
ccgagcaatccagaccctgcatctgcacaggcgcctgaagagcaccacaagaagcatgtc
gccgtgccggacatgagcgatgacgtggacccatgggcaacgccggcagcacctgtcgca
cacgcacaagatgcgaccgccaatacccaggccggccaagctgagcaattcaccgcgtct
acttcctcgaacgtgggtgccccggctgcggattctgctgcctcaacggcatccgctgac
ccgtggaaccagccggtgcctccgcctgccgaaccgatgggtggcccgtggaaccagcct
gctgcgtctgcgccgcaagctgcgccggatccatggaatcaaccagctcctccgcaatcg
gaaccggatccgtggaatcaaccgcagggtcaggctcagcggcagaccccatcacagagt
cagggtatgccgcaaagccagaactcgggcgctgctgacccgtggaaccagccaatgcca
ccgagccctcagccgcaggttgcggccgaggacgatgagtattcgatgagcgaccagtcg
cttggcgatgccacggccatgaagatggatgatctcaagaagctgttcgaggtcaagaag
gtcgaggagtttgcggccgatgacccaaagaacccgaagaacatccagcccgccaagaag
catacggatgactga
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