Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0426
Help
Entry
BBBR_0426 CDS
T04525
Name
(GenBank) putative adhesin
KO
K20276
large repetitive protein
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBBR_0426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_3
AAA_lid_2
AAA_5
Big_9
fn3
Cadherin_5
AAA
bpMoxR
MCM
Cadherin_4
Sigma54_activat
AAA_2
Mg_chelatase
RuvB_N
nSTAND3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
BAQ99464
UniProt:
D4BMV7
LinkDB
All DBs
Position
complement(542312..548836)
Genome browser
AA seq
2174 aa
AA seq
DB search
MGTSSQSHTDLHRIRNDRHGHPPSDNYTWAVPAFTLLILTVLIAGAVMISIVTRHHVQLD
DGTVWVTSLANQKAARFNVKNREADASVVSPSPRFDIAQHNGTTILAEPTKASAIASSTL
STSMQTSLKAHTTASVGGSTVAFINENTGNVWVGSSDELDAVSPSVDSPRMRLGTGGRIV
VTHDGAVYGYRPRDGVVFRLDSPNSSQIKQLESLTDGQPRAADSFTVIGGVPVISSGNTI
IHASGQTTIEASDTLTLQSPPVDGNQNDWVAASSPRGLAIVRLSSTAKPIFHLTGGTSQA
ARPVSVNGCIYAAWSQQARNYIRTCTPDSAHIAFQTLESIHATSELVFRTNHRVAVLNDV
IEGNVWNPDDSTAVIAMQWNQIQTQHHDSTQRNEDSATNHQDFSETCSEQSGDIKAEDDA
FGARAGSEQILDVLRNDEQTDCSVLNIIRVGAPQGGDVTVSPIYAGRYLQLDASAASAGT
VTFAYDISDGRGQTSTANVTVTLHDGDNHTPLQSDTPSEINVEQGASYVANALGSFVDPD
GDPLTLVSAVVQYTDKAQVFTRPDGKITFNAGDMTSGRVGVEITVSDGMATGTGFMYFSV
KPANTLPAVIDPIAVATTPDTDTVIELKPYVHGTSTQPMQLSHVNTLSGASTIAHPSDLS
IAFTASKPGTYYVPYTILQGSIPATGLARVDVHPVTKATAKPVAANDVALLGTDNTAIVE
PLSNDIDPMGGVLSVTSVDVPSDSGIKAGLVDHKRVYVTAHQVPSKPIPIRYNVANAAGT
ATGTIVLHPPALAAESSTPTAGDINIQVRTGGIVSVDVLNHVTYSDSTTITLKDNLQYDE
STFAGLVFTSGSIVRYQASSQAGVFPVTYTVEDHTGNAASGIVIITVHESQAGNKAAPTP
HNTEAQVAAGQTVRIPITLTGIDVDGDDDQLLGLGNTAPELGRIAEVGSDYLVYEAYPDS
CGTDIFSYAVEDWTGQRAQAQIRVGVFQGASESSVHARDDDITLRPNTSASVPVTLNDIS
ADNTDLTIGTTVEAQGIDDVMVENNMLLFTTPEHATTAHIAYTAYNTAGLADTATLTVNV
DPSAPIEPPAAYDCRVPASDTIDKQSVDVDVSPWIANPSGTASELEVAIHSSATDHARVG
EGSASTIVTVDLTSQARAVPYTVTNTTHHVTSTAFIHVPAYGVFPPILRPKAPEIIVNAR
QTVHININDYVRVGAGKEPYLESADSITATKASNTDFRVDGKTLKFTAIKDYAGPASITF
TVTDGNRPDASAIINTAVVTLPITVLGRTTPPPTFSSPTIDIEAGAEPKTIDLTALTHMP
PGLHDDEKRCVYSSGGTSSEHILSSLSSSGKLHISASKNAPAGVTASIPVHITYGKGTVH
AGVMVRVVESTRPLARLAAATLQLKAGSSGSVNPLENAYNPFPDSPLTVTACQADDTAKI
TITSCSSTAITISASPNIGASSNMVLVTVRDGTTATAREVTGTITLSIVDKPDAPLLFPI
AGDPQDGVVTLNWSAGAANGSPITDYRVRWSGASNGEQSCGTSTRCRITGLKNGRIYSFT
LSARNDVGWSAASAAVTAIPDKTPTAPVNVTVEGGNARAAITWSPIDGDFSEVDNYMVTV
SGVGVLQTKETGNTTTKLSFIFNNDSISDGTLVTATVKAHNRAGWSPESGTSEPKAIWGD
PDAPSIELADDDIPAVTITPGNNRNAGCERIELSGAAADTIGCSGGTVGFDISNQKDSAD
EITVTATLIPSRDAKPATATATFTSTDFTQSTTPQENTMNPTIDDATYLSDATRISHAVY
LPDDTRLAQTLYPPELEHQAPCDDTNISLQQFKPISHATQRPKTSHAGTFAQTAAQATPD
IHYFQQSFNALVENIAIAVAGKTTPIKQCVTALLAGGHVLLEDNPGTGKTQLARALANSI
DASFKRIQFTPDMLPSDVVGVTFYDQEHHEFEFRKGPIFASLVLADEINRASPKTQSALL
EVMEEQQVTVDGTTYNVPQPFIVIATQNPVDQLGTYKLPEAQMDRFLIRTSIGYPSQQVS
IDILKQIDIPDRAQTVSPVLTSHDVLQLRLMTAGIYIDDAIHEYIVRLVEATRHHESISI
GSSMRGALALARCARIWAAADGRDYVVPDDVNDLATPILAHRIMLVPEAIFDGITQESLI
EEILEEVPAPTVST
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtcatcacaatcgcatactgaccttcatcgcatcaggaatgacaggcacggc
catccgccctccgacaactacacgtgggcggttcctgcattcacgctgctcatactcacc
gtgctgattgccggggcggtcatgatcagcatcgtcacacgtcatcatgtgcaactggat
gacggcaccgtatgggtcacgtcgctcgccaatcagaaagccgcccgtttcaacgtcaag
aaccgtgaggctgatgcaagtgtcgtctcgccttcaccccgattcgacatcgcacagcat
aacggcaccaccattttggccgagcccaccaaggcttcagccattgcatcttccacgctc
agtaccagtatgcagaccagcctcaaggcacataccactgcctcagtaggcggaagcacc
gttgcctttatcaacgagaacaccggcaacgtatgggtcggatcgtccgacgaactcgat
gcggtgtcgccttccgtcgatagcccgcgcatgagactcggcacaggaggccgcatcgta
gtcacccacgatggagcggtctatggataccgtccccgtgacggcgtggtatttcggttg
gacagtccaaatagttcccagatcaagcagcttgaatccttgacggatgggcagccgcga
gcagccgatagcttcaccgtcatcggcggcgttccagtaatctcatcgggcaataccatc
attcacgcctccgggcagaccaccatcgaagcctcagatacactcacgctccagagtccg
cccgttgacggcaatcagaacgattgggtggcagcctcatctccacgcgggctcgcaata
gtacgactttcttccaccgccaaaccgatattccacttgactggcggcacgagccaggcg
gctcgtccagtttccgtgaatgggtgcatatacgcggcatggagccaacaggctcgcaat
tacatcagaacctgtactcccgatagtgcacatatcgcattccaaacgcttgaatcgata
cacgccacctctgaactggtgttccgcaccaatcatcgggttgcggtgcttaacgatgtg
atcgagggcaatgtctggaatccagatgacagcactgcggtcatcgccatgcaatggaac
cagattcagacgcagcaccatgacagtacccagcgaaacgaggattccgccaccaaccat
caggatttctcggaaacctgctccgagcaatccggtgacatcaaagccgaggatgatgca
ttcggagctcgcgctggatccgagcagattcttgatgtattgcgcaatgacgaacagacc
gactgctcggtattgaacatcatcagagtaggcgcgccccaaggaggcgacgtcaccgtc
tcgccaatctatgccgggcggtatctgcagcttgatgcttccgcagcatcggccggaacc
gtaacgttcgcctacgatatctccgacggtcgaggtcagacctcgaccgccaacgtcacg
gtaacgctgcacgatggagacaaccatacaccgttgcaatccgacaccccatctgaaatc
aatgtggagcagggagccagttacgtcgccaatgcgcttggcagcttcgttgatcccgat
ggggatcctcttaccttggtttccgcagtcgtgcaatacaccgataaggcgcaggttttc
acccggcctgatggcaaaatcaccttcaatgccggcgatatgacctccggccgcgtggga
gtggagatcaccgtctcagacggcatggccaccggcaccgggttcatgtatttctccgtc
aaaccggcgaacaccttgcccgcggtcatcgatccaatagccgtggccaccaccccggat
acggataccgtcatcgagctcaagccctatgtgcatggcacctccacgcagccaatgcag
ctgagccatgtgaatacgctgtccggcgcttccacaatcgctcacccgtccgatttgtcc
attgcattcacggcatccaaacccggcacctactatgtgccgtacaccatactccaaggc
tcgataccggccaccggtttggctcgcgtggatgtgcaccccgtaaccaaagcaacagcc
aaaccggtggcggccaacgatgtggcgctgctgggcactgacaatacggcgattgtggag
cctctgtcaaatgacatcgaccctatgggtggcgtgctatccgtaacctcggtggacgtt
ccttccgactccggcatcaaagccggattggtggaccataaacgcgtgtatgtcacagca
caccaagtgccgtccaaacccattcccattcgttacaacgtggccaatgcggctggcacc
gccacaggcaccattgtgttgcatccaccggcgttggcggcggaaagctccacgcccaca
gcaggtgacatcaacatccaggtacgtactggcggcatcgtatcagtagacgtacttaac
catgtgacatactccgacagcactacgatcacgctcaaagacaatctgcaatacgacgaa
agcaccttcgcgggtctggtgttcacgtctggcagcatcgtgcgatatcaggcatccagc
caagcgggggtcttccccgtcacctacaccgttgaagaccatacaggcaatgcggcatcc
ggcatcgtcatcatcaccgtgcatgaaagccaagccggaaacaaggccgcacccacaccg
cacaacactgaagcacaagtagccgcaggccaaaccgtacgcattcccatcacgctgacc
ggcatcgacgtggatggcgacgatgaccagctgctgggattgggcaacacagcgccggaa
ctagggcgcattgccgaagtcggctccgactatctggtttacgaggcatatccggactct
tgcggaaccgacatattctcctatgccgtggaggattggaccgggcagcgagcgcaggca
cagattcgggtgggcgtgttccagggcgcatcggaatccagcgtccatgcgcgcgatgac
gacatcacactacggcccaatacatcagccagcgtgccggtaacgctcaacgacatctcc
gcggacaacaccgatttgaccatcggcacgacggttgaagcgcagggaatcgacgatgtg
atggtggaaaacaatatgctgctattcaccacacccgagcatgccaccaccgcacatatc
gcgtataccgcgtacaacacggccggactggcagataccgccacgctcaccgtcaacgta
gatccaagcgctcccatcgagccacctgccgcctatgactgccgcgtgccggcctccgac
accatcgacaagcaatccgtggacgtggacgtctcgccatggatcgccaatccttcaggc
acggccagcgaactggaagtggccatacattcctcagccaccgaccatgcgagagtcgga
gaaggcagcgcatccaccatcgtcaccgttgatttgacctcgcaggcgagagccgtgccg
tatacggtgaccaacaccacgcaccatgtcacgtccactgcttttattcatgtgccggca
tatggcgtgtttccacccatactgcgccccaaggcaccggaaatcatagtcaacgcgcgc
cagaccgttcacatcaatatcaacgactatgtgcgtgtaggcgccggaaaagaaccgtac
ctcgaaagcgccgattccatcaccgccaccaaagcgtccaacaccgatttccgcgtcgat
ggcaaaactctgaaattcaccgccatcaaagactatgccggcccagcttcaatcaccttc
accgtgacggatggaaaccggcccgacgcctccgcaatcatcaatacagccgtggtcact
ctgccgatcacggtacttggcagaacaacaccaccgcccaccttttcttcacccaccatt
gacatcgaggccggcgctgaaccgaaaaccattgatctgaccgcactgacccacatgcct
ccagggctccatgacgacgagaaacgatgcgtctattcctcaggcggaacctcttcggag
catatcttgtcctcgttgtccagctcaggcaagctgcatatctcggcatccaaaaatgcg
cccgccggagtcaccgcctctattcccgtgcacatcacatacggcaagggcacggtgcat
gccggcgtgatggttcgcgtggtggaatccactcgtccactggcacgacttgcagccgca
acattgcagctcaaagccggctcctccggctcagtgaatccgttggagaacgcttacaat
ccgttccctgattccccactgaccgttaccgcatgtcaagccgatgacacagcgaaaatc
acgataaccagctgctcttcaacagccatcaccatcagcgcctcgcccaacatcggagct
tcttcaaacatggtgctcgtcaccgtgcgggacggcactacggccacagcacgcgaagtc
accggcaccatcaccctttccatagtcgacaagcctgatgctccgctgctctttcccata
gccggcgacccgcaggatggtgtggtgacacttaattggtcagcaggtgcggccaacggc
agccccattaccgactaccgggtgagatggagcggagccagcaacggagagcaatcctgt
ggcacgtccaccagatgccgaatcactggtttgaagaacggcaggatatattctttcact
ctctccgcccgcaacgatgtcggctggtcggcggcctccgcagccgtcaccgccattcca
gacaagactcccacagctcccgtgaatgtcactgtggaaggaggcaatgccagagctgcc
atcacctggagcccgatagatggcgatttcagtgaggttgacaattacatggtgacggtc
agcggcgtgggcgtattgcagaccaaagagaccggaaatacaacgaccaaactatccttc
atcttcaacaacgacagcatctccgacgggaccctggtaacggctacggtcaaagcacat
aacagagctggctggagcccggaatccgggacttcagaaccaaaggccatctggggcgac
cccgatgctccatccattgagcttgccgatgacgacataccagcagtaacaatcacgccg
ggtaataatcgcaacgccgggtgcgagcgcatcgagttgagcggggccgcagcagacacc
atcggatgttccggcggcactgttggcttcgatatatccaatcagaaagacagtgctgac
gagatcaccgtcacagccactcttattccctcacgcgatgccaaacccgccacagctacg
gccacattcacgtccactgacttcactcaatccactaccccgcaggagaacaccatgaac
cccaccatcgatgacgccacatatctttcagacgccactcggatatcgcatgccgtatat
ctgccggacgacacccgattggcacaaactctctatccacccgagttagagcaccaagcc
ccttgtgacgacacgaatatcagtcttcaacagttcaagccaatatcgcatgcaacccag
cgtccgaaaacctctcatgctggaacattcgctcagactgccgcccaagcaacacccgac
atacattattttcagcagtcattcaatgcgctggtcgagaacatcgccattgcagtggct
ggtaagaccacaccgatcaaacaatgcgtcaccgcattactggccggtggacatgtgctg
cttgaagacaatcccggcaccggtaaaacccagctggcacgggctttggccaattccatc
gacgccagcttcaagcgcatccaattcacaccagatatgctgccttcggacgtagtgggt
gtgactttctacgatcaggagcaccacgagttcgagttccgcaaagggccgatctttgca
tctctcgtattggctgacgaaatcaaccgcgcttcgccgaaaacccaatccgccctgttg
gaggttatggaagagcagcaagtcaccgtggacggcaccacctataacgtgcctcaaccg
ttcatcgtcatcgccacgcagaatccggtcgatcagctcggcacttacaagctgcccgaa
gcccagatggatcgctttcttatcagaacctcgatcggatacccgagccaacaggtgtct
atcgacatactcaaacaaatcgacatccccgaccgcgcacaaaccgtctccccggtgctc
accagccatgacgtgctgcaattgcgcctcatgactgctggcatttacatcgacgacgcc
atccacgaatacattgtgcgtctggtcgaagcgacccgccatcacgaaagtatctccata
ggctcctcaatgcgaggtgctcttgcgttggcacgctgcgcccgtatctgggccgccgct
gacggccgcgactatgtagtgccagacgacgtcaacgatcttgcgacgcccatacttgcc
caccgcatcatgctggtccccgaagccattttcgacggcatcacccaagaaagcctcatt
gaggagattcttgaagaggtgccggctcccaccgtcagcacgtga
DBGET
integrated database retrieval system
