Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0599
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Entry
BBBR_0599 CDS
T04525
Name
(GenBank) putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03420
Nucleotide excision repair
bbrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBBR_0599
03430 Mismatch repair
BBBR_0599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrd03400
]
BBBR_0599
Enzymes [BR:
bbrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBBR_0599
DNA repair and recombination proteins [BR:
bbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBBR_0599
MMR (mismatch excision repair)
Other MMR factors
BBBR_0599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAQ99637
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All DBs
Position
735740..737287
Genome browser
AA seq
515 aa
AA seq
DB search
MEQAQQILEGLDEQQRRAATTLNGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERALA
VTFSVKAAAEMRARLEQLGLQGGTSGVTAATFHSAALRQLNSVWADVCEAPFPHLIENQR
DTVSRAITRATAVRDIDALTVRDVLAEINWAKISLVPIDDYARISVEANRQPPAGFDAAR
FAAIYDAYEQEKTSQGEIDFDDILLLVCHIMDDFPEAAAQIRSSIGWLTVDEYQDVSPLQ
HRLLNLWLGGGGPNGKAAMNRNVCVVGDPAQTIYSFAGASSWHLLQFADEFGPLSADINL
NTDYRSTPEVVGLANRVLAAAPNREDYLKLVSAREKGVRISRTAYDTDDLEAQGVAARIA
RLVAQGAKPSDCAILTRINAQQPVFGAALRAARLKFRVRKDSGWQSSSLADDATTRRALL
EAMGLDATGSQQSTDPGVMISTIHAAKGLEFKHVFLVGCSEGLLPYGSPEPGETLEEERR
LMYVGVTRAEDSLHLSYARTKDGYGAQQRRPSRFL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcgcagcagattcttgaagggctcgatgagcagcagcgccgggcggcgact
acgctgaatggcccggtgcgcatcatcgccggtgcaggcgcaggcaagacccgtaccgtt
acgcgacgcatcgcctatgcctgcgcgacgggagcatggaagcccgagcgggcgcttgcc
gttacgttttcggtgaaagccgctgccgaaatgcgtgctcgacttgagcagctggggctg
caaggcggtacatccggtgttaccgccgctacttttcactctgcggcattgcgccagctc
aacagtgtgtgggccgacgtctgtgaagcgccattcccgcatctcatcgaaaatcagcgt
gacaccgtatctcgtgccatcactcgtgctaccgctgtacgagatattgatgcactgacc
gtgcgcgatgtactggctgaaatcaattgggccaaaatttctctggtacccatcgatgat
tacgcgcgtatcagcgtagaggccaatcgtcagccgcccgcagggttcgatgccgctcga
ttcgccgctatctatgatgcgtatgagcaagagaaaacatcgcaaggagaaatcgatttt
gacgacatcctgctgctggtatgccacatcatggatgattttcccgaagcggcggcgcag
attcgttcctccatcggctggctcaccgttgatgagtatcaggatgtttctccgctgcag
catcgtttgctgaacttatggcttgggggaggcgggccgaatggcaaggctgctatgaac
cgcaatgtatgtgtggtcggcgaccctgcacagaccatctactcgttcgcgggtgcatcc
agctggcatctgttgcagttcgccgatgagttcggccctctgtccgcagacatcaacctc
aacaccgactaccgttcgactcctgaagtggtgggtctcgccaatcgggtgcttgccgcg
gcccccaatcgtgaggattatttgaagctggtttccgccagggagaagggggtgcgcatc
agccgaacggcctatgacaccgatgacctggaagcacaaggtgtggcggctcgcatcgca
cgacttgttgcgcagggggcgaagccctccgattgcgcgattctgacgcgcatcaacgcg
cagcagccggttttcggtgcggcattgcgcgcggcaaggctgaaattccgcgtgcgtaag
gattccggatggcagtcttcgtcgctcgcggatgatgccacgacacgcagggccctgttg
gaagccatgggattggacgccacaggcagccagcagagcaccgaccccggcgtcatgatt
tccaccatccatgcggccaaaggtctggaattcaaacacgtctttctggtcggctgctcc
gaagggctattgccgtacgggtcaccggaaccgggggagacgttggaagaggagcgacgg
cttatgtacgtgggcgtcacacgagccgaggactcgctgcatctgtcatatgcacggacc
aaggatgggtatggggcgcagcagcgccgcccttcccgcttcttgtga
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