Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0844
Help
Entry
BBBR_0844 CDS
T04525
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03420
Nucleotide excision repair
bbrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBBR_0844
03430 Mismatch repair
BBBR_0844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrd03400
]
BBBR_0844
Enzymes [BR:
bbrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBBR_0844
DNA repair and recombination proteins [BR:
bbrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBBR_0844
MMR (mismatch excision repair)
Other MMR factors
BBBR_0844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAQ99882
LinkDB
All DBs
Position
1017142..1019817
Genome browser
AA seq
891 aa
AA seq
DB search
MYDEPEVIARSAQELVGDLNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAVEMRERLGSLIGPVAQRMWVSTFHSACVRILRRDGKSIGLKSGF
SIYDSADSERLVKIIATEFNLDIKRYTPRSILGHISDLKNNLTGWKENLAVHAPDFTPGQ
RGYQFGTVGDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDTGEKAIPGSPNAGKSGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPI
VGYAADNAQQEAQWVATEIARLHAEEDIAYSDMAIMYRANAQSRSLEEALINAGLPYQLV
GGTKFYERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGNRAEGILLAYARERGTSF
FYALMHLDEIQDVPTRTATQLKAFRDLMGELSQFTRAHDAKPSEIVAEVLEKSGLRAELE
KSVDPQDASRLENLSQLQSTAAEFEQNTPDATLSAFLETTALVADSDQLPGEAEDSGKVT
LMTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTELQEERRLAYVGITRAKQRLYVTRA
AVRSQWGQAADMMPSQFLDEIPDSLIDWKRREAGVERMRANWESDGFADDYGGWDDDDFG
GTTFGGSSTFGSRGSGSSYGSRSHYGSSSYGSGSSYGSRSGGSSYGSRSGSSYGSRSRSG
SSYGSGSGSSYGSRSRSGPASGGTRAGKVTTRHTTPKSGSAGSSMPSSKLAKDNGLNISD
FAVGDMISHDQYGLGKVTDAQDKGRNSVITVDFGSAGVKRLMLRVAPIEKL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgagccggaagtcatcgcccgcagcgcgcaggaactcgtaggcgacctgaac
ccgcagcaggccgaagccgtgcaataccgcggccaggcgctgctgatcggagccggcgcc
ggttccggcaaaacccgagtcctcacccgacgcatcgcatggatcctgagccagttcggc
gcatggcccagccagatcctggccatcaccttcaccaacaaggccgccgtcgagatgcgc
gaacgactcggctcgctgattggcccggtggcccagcgtatgtgggtctccaccttccac
tccgcctgcgtgcgcatcctgcgccgcgacggcaaatccatcggcctcaaatccggcttc
tccatctacgattccgccgactccgagcgactcgtcaaaatcatcgccaccgaattcaac
ctcgatatcaagcgctacaccccgcgttcgatcctcggccacatctccgacctgaaaaac
aacctgaccggctggaaggaaaacctcgccgtccatgcgcccgacttcacgcccggccag
cgcggctaccagttcggcacggtgggcgaccttgaagccatctacgcggtgatatacgcc
gaatacgagcacaggctcgctctggccaacgccgtcgacttcgatgatctgattgggcgc
acggtcgaactgctgcgcaccgacccggccgtcgccgagtactaccatcaccgtttccgc
tacattctggtcgacgagtatcaggacaccaaccacgcccagtatgtgctcgtacgcgag
ctggccggcgtggacacaggggagaaggctattccgggctcgccgaacgcaggcaaatcc
ggccctgcttggatcaccgtcgtgggcgattctgaccagtccatctatgccttccgcggc
gccgacatccgcaacatccaggatttcgaacaggacttcccgaacgccaagaccatcatg
ctcgaacagaactatcgttcgacgcagaccattttggacgcggccaacgcggtgatcagc
aacaacgagggacgcaagcccaagaaactgtggacagcactcggcaaaggcgagccaatc
gtcggctacgcggcggataacgcccagcaggaggcccagtgggtggccaccgaaatcgcc
cgactgcacgccgaagaagatatcgcctactctgacatggcgattatgtatcgcgccaac
gcgcagtcccgctcgctcgaagaggcgttaatcaacgcagggctgccgtaccagctcgtc
ggcggcaccaagttctacgaacgccgtgaaatcaaggacgcgctggcctacctgcaggcg
ctggtcaacccggatgatgacgtgaacctgcgtcgaattttgaacgtgcccaagcgcggg
ctcggcaatcgtgccgagggcatcctgctcgcctatgcgcgcgaacgtggcaccagcttc
ttctatgcactcatgcatttggatgaaattcaggacgtgcccacgcgtaccgccacgcag
ctcaaggccttccgtgatttgatgggtgagctctcgcaattcacgcgagcacatgacgcc
aagcccagcgagattgtggccgaagtgctggagaagtccggcttgcgtgcagagctggaa
aagtccgtggacccgcaggacgcctcccgtttggaaaacctctcccagctgcagtccacc
gcagccgagttcgagcagaacacgcccgacgccacgctatccgcattcctggagaccacc
gcgctcgtggccgattccgaccagctgcccggcgaggcggaggattccggcaaagtgacg
ctgatgaccctgcacacggccaagggcctcgaatacccggtggtgttcctgaccggcatg
gaacagggcacattcccgcattcgcgttcgatggaggacaccaccgaactgcaggaggaa
cgccgacttgcctatgtgggtattacccgcgccaagcagcgcctgtatgtcacgcgcgca
gccgtacgctcccagtgggggcaggccgccgatatgatgcccagccagttcctcgacgag
atccccgattcgctcatcgattggaaacgccgcgaggccggcgtggaacgcatgcgcgcc
aactgggaatccgatggattcgccgacgattacggcggctgggatgatgacgattttggc
ggtacgacgttcggtgggtcctcgacattcggctctcgcggttcgggttcgtcgtatggc
tcgagatctcattacggctcgtcaagctatgggtctggctcgtcctatggctcccgttcg
ggcggttcatcgtatggctcacgttccggctcctcctacggttcccgctcgcgctcgggt
tcgtcctatggttcgggttccggctcttcatatggttctcgttcccgttccggtccggcg
tccggcggcactcgtgccggcaaggtcactacgcgccacaccacgccgaagtccggttcc
gccggatcttccatgccaagttccaagctcgctaaagataatggactgaatatctctgac
tttgccgtgggcgacatgatcagccacgaccagtacggtctcggcaaggtcaccgacgcg
caggacaagggccgcaattcggtcatcaccgtggacttcggctccgctggagtcaaacgc
cttatgctccgcgtggcaccgatcgaaaagctgtga
DBGET
integrated database retrieval system
