Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_1163
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Entry
BBBR_1163 CDS
T04525
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrd03032
]
BBBR_1163
03400 DNA repair and recombination proteins [BR:
bbrd03400
]
BBBR_1163
Enzymes [BR:
bbrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBBR_1163
DNA replication proteins [BR:
bbrd03032
]
Prokaryotic type
DNA Topoisomerases
BBBR_1163
DNA repair and recombination proteins [BR:
bbrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBBR_1163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
BAR00202
UniProt:
D4BS93
LinkDB
All DBs
Position
1352130..1354850
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AA seq
906 aa
AA seq
DB search
MASHRKPSAQTYDPRTVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IVYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARLGPAALGMNADIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLV
NGGSGIAVGMATNLATHNLGEVVNAAKFLMAHPDATLEQLMRYVPGPDWPTGGTIIGRDG
IREAYATGRGTLTTRAATHIEHVTARKQAIVVTELPYMVGPEKVIERISDGVKNRKLEGI
SGAFDLTDRHNGTRIVIEIKTGFDPHAVLVQLFKHTPLQDNFAMNNVALVDGRPHTMGLK
EMLQVWVDHRRVVIRRRSEYRKKKALERLHLVEGLLLAMLDIDEVIQVIRTSDDADAAKT
RLMAVFDLDEVQAQYILDLRLRRLTKMNRIELEAERDDLKKRIEELTRILASAEALDHVV
TSEMDEAVDKWGSPRRTVLLDADPDGTLTPVVAQGSGTSGISKSALEAVKSATTISSAEA
DVAAAAAAAKKTGEQSALTGALKIEDEPCVVMMSATGLIARTTPSAMDVFNSRSASDERL
HDDQITTIFRTSTRATYGLVTSAGRLVLAHVVDLPALPASATLSLQGGVQADDLISMTES
TDPVRGERVVTAIAMEQSADNGENGGDGETTAEAKPLPSLAIGTRNGVVKRWNREAPTTM
DSWPVIDVKDGDEVVFAAVAENDDRLVFVSSDSSLLTFDAKNVRPQGRTAGGMAGIKLAE
GAHVMAFNVVPAGKVAWTYEEGENGLTSGAGAVVLTVAGDEDALPGTENGAAKVTPLEMY
PTKGRATGGVRSQRFLKGQNTLILAWVGPYPLHASTSAGSPVELPKPDMRRDGSGVDLAS
PIAFIA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaccgcaaaccgtccgcgcaaacctatgatccgcgtacggtcaaggagcat
atcgtcgagacgccgctgaacgaggagatgagcaagtccttcctcgaatatgcgtattcg
gtgatctacgcgcgagccctgcccgatgcgcgcgacggcctgaagccggtgcagcgccgc
atcgtctaccagatgggcgagatgaacctgacccccgaccgcccgtacatgaagtccgcc
cgcgtggtgggcgaggtgatgggcaagctccacccgcacggtgattccgcaatctacgag
gccatggtgcgtttggcccagccattcgcgatgcgtttgccgctggtggacggccacggt
aacttcggttccttggacgacggcccggcagcctcccgttataccgaggctcgactcggc
ccggcagctctcggcatgaacgcggatatcgacgaagacaccgttgacttcacgccgaac
tacgacaacaagctcaaagagccgaccgtattgccggccgcaattccgaacctgctggtc
aacggcggttcgggcatcgccgtaggcatggccaccaatctggccacgcataatctcggc
gaagtggtgaatgctgcaaagttcctcatggctcacccggatgccacgcttgaacagctg
atgcgctatgttccgggccccgactggcccaccggaggtacgatcatcggccgcgacggc
attcgcgaggcctacgccaccggccgaggcacgctcaccacgcgcgccgccacccatatc
gagcatgtcacagcccgcaagcaggccatcgtggtcaccgagctgccgtacatggtaggt
ccggaaaaggtgatcgagcgtatttccgacggtgtgaagaaccgcaagctggagggtatc
tccggcgcgttcgacctgaccgatcgtcataacggcacacgtatcgtcatcgagatcaag
accggtttcgatccgcatgcggtgctcgtccagctgttcaagcacacgccgttgcaggac
aacttcgccatgaataacgtggcgttggtggacggccgtccgcacacgatgggcttgaaa
gagatgctgcaggtatgggttgatcaccgtcgcgtggtgattcgccgccgtagcgaatac
cgcaagaagaaagccctggaacgcctgcacctggtcgagggactactcctggccatgctg
gacatcgacgaggtaatccaggtgatccgcacttcggatgatgcggatgccgcgaagacc
cgtttgatggccgtattcgatctagacgaggtccaggcccagtacattctggatctgcgt
ctgcgccgattgaccaagatgaaccgcatcgaacttgaggccgagcgtgacgatttgaag
aagcgcatcgaggagctcacccgcattctggcctccgccgaagcgctcgaccatgtggtc
accagcgaaatggatgaggccgtcgataagtggggatcgccgcgtcgcaccgtgctgttg
gacgccgatcccgacggcacgttgacgccggtcgtggcacagggttccggcacttccgga
atttcgaaatccgcgctggaggctgtgaagtccgccaccaccatttcctccgccgaggcc
gatgtggctgccgccgctgcggccgccaagaagaccggcgaacagtccgctttgaccgga
gccctgaagatcgaggacgagccgtgcgtggtgatgatgagcgccacgggcctgatcgcc
cgtaccacgccgagcgccatggatgtgttcaactcacgttccgcgtccgacgaacgtctg
cacgatgatcaaatcaccacgattttccggacttccacccgcgccacctatggtctggtc
acctcggccggacgcctggtgctggcacatgtggtcgatctgccggccttgccggcgtcc
gccacgctttctctgcagggcggagtccaggccgacgacctgatcagcatgaccgaatcc
accgaccccgtacgcggggaacgagtggtgaccgcaatcgccatggagcagtcggccgat
aacggcgaaaacggcggcgacggcgaaaccacggcggaggccaagccgctgccgtcgctg
gccatcggcacccgcaacggtgtggtcaagcgttggaaccgagaagctcctaccaccatg
gattcctggccggtcatcgacgtgaaggacggggacgaagtggtgttcgccgccgtggct
gagaatgacgaccgtctggtgttcgtttcctctgattcctcgctactcaccttcgatgcg
aagaacgtgcgcccgcagggccgcacggccggcggcatggccggtatcaagctcgccgag
ggtgctcatgtgatggccttcaatgtggtgcccgccggcaaggtggcttggacctacgag
gaaggcgagaacggtctgacttcgggtgcgggcgcggtagtgctcaccgtggccggggat
gaggatgctctgcccggtaccgaaaacggcgccgccaaggtgactccgctggagatgtat
cccaccaagggtcgtgccaccggtggcgtgcgttcccagcgcttcctcaagggccagaac
acgctgattctcgcctgggtgggcccctatccgctgcacgcctccacatccgccggctcc
ccggtcgagcttcccaaacccgacatgcgccgcgacggttccggcgtggacctcgcatcc
cccatcgcgtttatcgcatag
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