Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_1368
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Entry
BBBR_1368 CDS
T04525
Name
(GenBank) thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd00730
Thiamine metabolism
bbrd01100
Metabolic pathways
bbrd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BBBR_1368
Enzymes [BR:
bbrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BBBR_1368
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
TMP-TENI
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAR00407
UniProt:
D4BRL3
LinkDB
All DBs
Position
1579996..1582749
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AA seq
917 aa
AA seq
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MSNEYPYASMRDSFDLSAYFVVGPEDCKGRPLTDVVDQALHGGATFIQLRAKEADASELT
DMARDIAQIIEDNEKSDSVAFVIDDRADVVWQARRKGIKVDGVHIGQTDMEPREARALLG
DEAIVGLSAETESLVQLINELPDGCIDYIGAGPLHVSTTKPEASVGGNDGSGKTLDAAQI
NTICVASEFPVVVGGGVTAADMAMLAGTKAAGWFAVSAIAGAENPEEAARTMVEGWKAVR
GDKKHGYAPRVVAHTPAADTQAAQEGAAKPGSEATEKKFTNAKDAKDAQKLAKQQRVDIA
ARGSKQRDKAHIRKTKSVPFTYQYGSYDLEVPYTEIKLSDTPGVGPNPPFHDYNTEGPKC
DPKEGLKPLRLDWIRDRGDIEDYEGRRRNLEDDGKRAIKRGRATKEWRGRKHEPMRAKDH
PITQMWYARHGIITPEMQYVATRENCDVELVRSELAAGRAVMPCNINHPEAEPMIIGSAF
LTKLNANMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIG
TVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRVTGIV
SRGGSIMADWCLRHHQESFLYTHFDELCDIFAKYDVAFSLGDGLRPGSLADANDAAQLSE
LMTLGELTERAWAKDVQVMIEGPGHVPFDTVRMNIELEKAVCKGAPFYTLGPLTTDTAPG
YDHITSAIGATEIGRYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPH
AMDRDNAISKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMA
ISQNIRKAFGGEAAQQQIVKEAAAGVDSEALAKAKANVDNDVVSANVLSPEEILAGMDAM
SEKYTAQGGKLYSTAQE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaatacccatacgcctccatgcgagacagcttcgacctgtccgcgtacttc
gtggtggggccggaggactgcaaaggccgtccgctgaccgacgtggtggatcaggctctg
cacggcggcgcaaccttcatccaactgcgcgccaaggaggccgatgcctctgagctgacc
gacatggcccgcgacatcgcgcagatcatcgaggacaatgagaagtccgattccgtggcc
tttgtgatcgacgaccgtgccgacgtggtgtggcaggcccgccgcaagggcatcaaggtg
gacggcgtgcacatcggccagaccgacatggagccgcgcgaagcccgcgccctgctcggc
gacgaggccatcgtgggtctgtcggctgagaccgaaagcctcgttcagctcatcaacgag
ctgcccgacggctgcattgactacattggtgccggtcctctgcacgtctccaccaccaag
cccgaggcttccgtgggcggcaacgacggctccggcaagacgctggacgccgcccagatc
aacaccatctgcgtcgccagcgagttcccggtggtcgtgggcggcggcgtgaccgcagcc
gatatggccatgctcgccggcaccaaggccgctggctggttcgcggtctccgccatcgcg
ggtgccgagaacccggaagaggccgcgcgcaccatggtcgaaggctggaaggccgtccgc
ggcgacaagaagcacggctacgcgccgcgcgtcgtagcccacacccccgctgctgatact
caggctgctcaggaaggggccgcaaagcctggctccgaggccactgagaagaagttcacc
aacgccaaggacgccaaggatgcccagaagctcgccaagcagcagcgcgtggacatcgcc
gcccgtggttccaagcagcgcgacaaggcgcacatccgcaagaccaagtccgtaccgttc
acctatcagtatggttcctacgacctggaagtgccgtacaccgaaatcaagctgagcgac
acgcccggcgtgggcccgaacccgccgttccacgactacaacaccgaaggccccaagtgc
gacccgaaggaaggtttgaagcccctgcgtctcgactggatccgcgaccgcggcgacatc
gaagactacgagggccgccgccgcaaccttgaggatgatggtaagcgcgccatcaagcgc
ggccgcgccaccaaggaatggcgtggacgcaagcatgagccgatgcgcgccaaggaccac
ccgatcacccagatgtggtacgcccgccacggcatcatcaccccggagatgcagtacgtg
gccacccgcgagaactgcgatgtggagctcgtgcgctccgagctggccgccggccgcgcg
gtgatgccctgcaacatcaaccaccccgaggccgagccgatgattatcggatccgccttc
ctgaccaagctcaacgccaacatgggcaactcggccgtcacctcctccatcgacgaggaa
gtggagaagctgacgtgggccaccaagtggggcgccgataccgtgatggacctgtccacc
ggtaacgacatccacaccacccgtgagtggattctgcgcaactcccccgtgccgatcggc
accgtgccgatgtaccaggccctcgaaaaggtcgaggatgatgcctccaagctgagctgg
gagctgttccgcgacaccgtgatcgaacagtgcgagcagggtgtggattacatgaccatc
cacgccggtgtgctgctgcgttacgtgccgctgaccgccaaccgcgtgaccggcatcgtc
tcccgcggtggctccatcatggccgactggtgcctgcgccaccaccaggagagcttcctg
tacacgcacttcgacgagctgtgcgacatcttcgccaagtacgacgtggcgttctctctg
ggcgatggcctgcgccccggctccctggccgacgcgaacgacgccgcgcagctttccgag
ctcatgactctgggcgagctgaccgagcgcgcctgggccaaggacgtgcaggtgatgatc
gagggcccgggccacgtgccgttcgacaccgtgcgtatgaacatcgagctggagaaggcc
gtgtgcaagggcgccccgttctacaccctcggaccgctgaccaccgataccgctccgggt
tacgaccacatcacctccgccatcggcgccaccgagatcggtcgttacggcaccgctatg
ctgtgctacgtgaccccgaaggaacacctcggcctgccgaacaaggatgatgtgaagcag
ggcgtgatcgcctacaagatcgcctgccacgccgcagacatcgccaagcaccacccgcac
gcgatggatcgtgacaatgcgatttccaaggctcgcttcgagttccgttggctcgaccag
ttcaatctgtcctacgatccggacaccgccatcgccttccacgatgacaccctgcccgcc
gagccggccaagatggcgcacttctgctcgatgtgcggcccgaagttctgctcgatggcc
atctcccagaacatccgcaaggcattcggtggcgaggccgctcagcagcaaatcgtgaag
gaggctgctgctggcgtcgactccgaggcactggctaaggccaaggccaatgtcgataat
gacgtggtgtctgccaacgtgctcagccccgaagaaatcctcgccggcatggatgcgatg
agcgaaaagtacaccgcccaaggcggcaagctctactccaccgcccaggagtaa
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