Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_1424
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Entry
BBBR_1424 CDS
T04525
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBBR_1424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrd03400
]
BBBR_1424
Enzymes [BR:
bbrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBBR_1424
DNA repair and recombination proteins [BR:
bbrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBBR_1424
Prokaryotic type
BBBR_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
BAR00463
UniProt:
D4BRF2
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All DBs
Position
1646439..1647128
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AA seq
229 aa
AA seq
DB search
MIKPLRELVEPGWANALADVEPTIHRMGDFLREENAAGRPWLPASHNILRAFTIPFDSIK
VLIVGQDPYPTPGHPVGLSFCVAQEVRPLPKSLINIYKELVDDLGVPMPPNGDLTAWTER
GVMLLNRCLTVGVGRPNSHQGKGWEEVTEAAIRALNARVDGNGKPKPLVAILWGRNAQSL
EPLLTNAFIIKSPHPSPLSASRGFFGSKPFSRANQALINMGAEPVDWSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccattgagagaactggtagagcccggatgggcaaacgcactggccgatgtc
gagccgaccatccaccgcatgggcgattttctccgggaggagaacgccgcaggcagaccc
tggctgccggccagccacaatattctcagggcctttaccattccgtttgattcgatcaag
gtactgatcgtgggccaagacccctaccccactcccgggcatccggtgggactgagcttc
tgcgtggcacaggaggtacgaccactgccgaagagcctgattaatatctataaggaactg
gtcgacgatctaggcgtgccgatgcccccgaacggagacctgacagcatggaccgagcgc
ggggtcatgttgctgaacaggtgcttgaccgtgggagtcggacgccccaactcccatcag
ggcaaaggctgggaagaagtcaccgaagccgctatccgagcattaaacgcacgcgtggac
ggcaacggcaaaccgaagcccttggtggctattctatggggacgcaacgcgcagagtctg
gaaccgctgctcaccaacgcctttattattaagtcacctcatccgagcccgctttccgca
tcccgaggtttcttcggctccaaacctttctctcgagctaatcaggcccttatcaacatg
ggtgccgagcccgtggattggagtctgtaa
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