Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_1603
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Entry
BBBR_1603 CDS
T04525
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrd03016
]
BBBR_1603
Enzymes [BR:
bbrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBBR_1603
Transfer RNA biogenesis [BR:
bbrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBBR_1603
Prokaryotic type
BBBR_1603
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
BAR00642
LinkDB
All DBs
Position
complement(1873427..1874614)
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AA seq
395 aa
AA seq
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MPKAWIKGTPHMPQTTPSGLLVIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGA
LVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEVRSRWLELSSQLTE
GGHSEGPSSLPASSWQQLLTRTIAANFTGDIEQIPNTFSAIKINGQRAYDLAREGKDVEL
KPRPVTISEFTVLAIRSGFVTGKQSDEALQERGMVSVLDVDVRVSCSSGTYIRALARDLG
DKLGVGGYLTRLRRTRVGNFALPDDTSGLLSPDAVSETQTHTITAHTEQKTFTNREGETI
TRNKCVLDTPEGFDGAGRCAWLIGRSLTMEQAARSAMPALDITSKEAAELRFGRRIERTI
HEPAAAIVPQTHDVVAIIERANGHQAKPITVFPLA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggcatggataaagggaacaccgcatatgcctcaaacaactccaagcggcctg
ctcgtcatcgacaagccgcaaggcgtgaccagtttcgatgcagtggccgccgtgcgcggc
gcgttgcatatcaagaaagtcggtcacgccggcacacttgatccgatggccaccggagcg
ttggtcatcgcattcggccatgccacgcgtctgctcaatgccatcgttgcacatgataaa
acctatgaggccaccattcgtctcggcttgcgcaccaccaccgacgatgccgaaggcgag
gtgcttgtcgatgacgaagtccgctcccgctggctggagctgtcgtcgcagctgactgaa
ggtggtcatagcgagggaccatcatcattgccagcttcctcgtggcagcagctactcact
cgcactatcgccgccaacttcaccggcgatatcgagcaaattcccaacactttttccgcc
atcaaaatcaatggtcagcgggcttatgacttggcccgcgaaggcaaggatgtggagctt
aagccacgtccggtcactatcagcgaattcactgtgctggctattcgcagtggattcgtg
acggggaaacagtctgatgaagcgttgcaagagcgcggaatggtttcagtattggacgtc
gatgtacgcgtcagctgctcgtcgggtacgtatattcgcgcattggcccgtgacttgggc
gacaagttgggtgtcggtggttatctgacccgtttgcgccgcaccagagtcggcaacttc
gccctgccggacgacaccagcgggcttctttcgcctgatgcggtgagcgagacgcagacc
catacgatcacggctcataccgagcagaaaacgtttaccaatcgcgaaggcgaaaccatc
actcgcaataagtgcgtgctcgacaccccggaagggtttgacggcgctggtcgatgcgca
tggctgattggtcgctcattgaccatggaacaggccgcccgcagcgccatgcccgctctt
gacattacgtcgaaggaagctgcggagctgcgttttgggcgtcgcatcgagcgcacgatt
catgagcctgccgccgccatcgtgccgcaaacccatgatgtggtggccatcatcgagagg
gcgaatggccatcaggccaagccgatcaccgtattccccctcgcgtaa
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