Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_1756
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Entry
BBBR_1756 CDS
T04525
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbrd
Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd00300
Lysine biosynthesis
bbrd00470
D-Amino acid metabolism
bbrd01100
Metabolic pathways
bbrd01110
Biosynthesis of secondary metabolites
bbrd01120
Microbial metabolism in diverse environments
bbrd01230
Biosynthesis of amino acids
Module
bbrd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBBR_1756
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBBR_1756
Enzymes [BR:
bbrd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBBR_1756
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAR00795
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All DBs
Position
complement(2039790..2041412)
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AA seq
540 aa
AA seq
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MPISPIWPAVTAVNANGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRAAAEAF
NTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
DEIALAIEQGFAKIVVDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHED
QKFGVPLLAAGADAAVLDVLNNLTDVTPAATNARIAESDVNAGNDHPQSTAPIAPASGSG
KPARELRYDVKYPYDLSHEEVSDTDKVLAAAMEAIADGPSIAVLKTILANQDVLELVGAH
SHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDSMDIDVE
LTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSAGNPI
GERVYVSVDGGMSDNIRPALYGADYTARLANRTGSTETMLARVCGMHCESGDIVVHEVRL
PADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDDLLDLDQG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttctccaatttggccggccgtcacggccgtgaatgccaatggtgccattgca
tttcatggccgcaccgccgaatccctgttggacgagtttggctcgccgctttacctcatc
gataccgatgaggtatcggcccgtgccaagcacttcgtacgcgctgcagccgaggcattc
aacacctccaccacgcacgtgagctttgccggcaaggcgttcctgtccaaggaaatcgtg
cgactggtcgccgaggctggcatgtttgtggacacctgcacgatgggggagatgcgaatc
gccctcgctgccggtgtgcccggccgccgcctagtgctgcatggcaacaacaagtccgat
gatgaaatcgcgctggccatcgaacagggcttcgccaaaatcgtggtcgatgagcctaat
gagccggagcgcatcgccgccatcgcccgtaaactcggcaagcgtgcccgcgtgatgctg
cgtgtcactgtcggcgtgcatgccggtggtcacgaatacatctccaccgctcacgaggat
cagaagttcggcgtcccgctgctggcggccggagccgacgccgcagtgctcgacgtgctg
aacaacctgacggacgtgacacctgccgcgaccaacgcgcgtattgcggagtcggacgtt
aatgctggcaatgaccaccctcagtcgactgcgccgatagctcccgccagcgggagcggc
aaaccggcacgcgaactgcgttatgacgtcaagtatccgtacgacctgagccatgaggaa
gtctccgatacggataaggtacttgccgccgctatggaagccatcgcagacggtccgtcc
attgccgtgctcaagaccatcctggccaatcaggatgtgctggaactggtcggtgctcac
tcgcatatcggctccaacatccacgacgcggatgccttcatccacgccgccaagcgcatg
atgctgctgcgcaagaccctgtgggccaccgacgcctacatcctgcccgaaatcgatctc
ggcggtggttactccgtggcctacaccgacggcgaagattccatggatatcgatgtggag
ctcactcgtctggccggctcggtcagcgacacaaaccgtgctctgggcatgcccgccccg
gccatcagcttcgagcccggccgttacatcgtggctccagccggcgtgaccctgtatcgt
gtaggcaccatcaagcatgtgcacctgagcgatgccaaagacagtgccggcaacccgatt
ggcgagcgtgtgtatgtgtctgtggatggcggcatgtccgacaatatccgtccggcactg
tacggagccgattacaccgcacgtttggccaaccgaaccggctctactgagacgatgctt
gcccgcgtgtgcggcatgcattgcgaatccggcgatatcgtggtccatgaggtgcgtttg
cccgcagatttgaagcgcggcgacattcttgccgtgccggtcaccggagcatatggccgt
actatggccagcaactataaccaggcgttgattccagctgtggtcgccgtgtctgagcag
ggcgcgcatgttatgttgcgccgccagaccatcgatgacctgctggacttggatcaaggc
tga
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