Bifidobacterium breve 12L: B12L_0006
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Entry
B12L_0006 CDS
T03118
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbre03032
]
B12L_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbre03400
]
B12L_0006 (gyrA)
Enzymes [BR:
bbre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B12L_0006 (gyrA)
DNA replication proteins [BR:
bbre03032
]
Prokaryotic type
DNA Topoisomerases
B12L_0006 (gyrA)
DNA repair and recombination proteins [BR:
bbre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B12L_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
Motif
Other DBs
NCBI-ProteinID:
AHJ14818
LinkDB
All DBs
Position
7355..10045
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AA seq
896 aa
AA seq
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MADETNNTGDEQFTPDGSMEPLSPQEADTTDYGLMESGERIQRKDLQQEMRESYLAYALS
VIVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAIYD
TLVRMAQSWSMRNLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFVP
NYDGKTQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNMREVAEGVHWALEHPDASREE
LLENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEINGRMCLVVTELP
YQVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLDVIARRTAYLKREAEERDHILQGYL
KALDMLDEVIALIRASEDTDTARTGLMELLDIDQVQADAILAMQLRTLTRMNRDKIVAEH
EELQRKIADYIDILAKPERQRKIIGDELDEIVGKYGDERRTKILPFSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKADEYRAQHRGGKGIKGTKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFAPDESIQAVLSIPNYEVAKYLVLATRSGKVKKT
PLAEYDSPRQGGLIAVRLMADENGENADELIGAALCNAEDDIILVSKLGMSLKFQANDEQ
LRPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLFVVTNEGFAKRTAISEYRLQGRNG
LGIKAVQLVEGRGSLVGALVVSEDDQVMAIMKSGKVIRSNVDEVKRTGRNTQGVTFAKPD
KGDEILSIARNEEKDDPEEEVADNGTAEAGQSPAEPVNESNETAQSGENVNNVDEA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaacaaataacaccggtgacgaacagttcaccccggatggctcgatggag
ccgttgagcccgcaggaagcggacaccactgactacggtctgatggaaagcggcgaacgc
atccagcgcaaggatttgcagcaggagatgcgcgaatcctacctagcctacgccctttcc
gtcatagtggaacgtgctctgccggacgtgcgcgacggcatgaaacccgtgcatcgccgt
gtgatctacgcgatgtacgacggcggctatcgccccgaccgcggctacaacaagtgctcc
cgcgtggtcggcgacgtcatgggtaaataccatccgcacggcgactccgccatctatgac
actttggtgcgcatggcccagtcctggtcgatgcgcaacctgctcgtcgacggtcagggt
aacttcggttcccctggcgacgaccctgccgccgccatgcgttacaccgaatgccgtatg
gccccgctggccatggaaatggtgcgcgacatcgacaaggacaccgtcgacttcgtgccc
aactacgacggcaaaacccaggaaccgactgtattgccggcccgcttcccgaacctgctg
gtcaacggctccgccggcatcgccgtgggtatggccaccaatattccgccgcacaacatg
cgtgaggtggccgaaggcgtgcactgggcgcttgagcatccggacgccagccgcgaagag
ctgctggaaaacctgattcgcatcatcaagggaccggacttccccaccggcgccaccatc
ctcggtcacaagggcatcgaacaggcctaccgcaccggccgtggcctcatcactatgcgt
gccgtggtcaacactgaggagatcaacggccgcatgtgcctggtggtcaccgagctgccg
taccaggtcaacccggatcgtctggtcgtctccattcgtgaggccgtgcgcgacggcaag
attcagggcatcgccgacatgcgcgacgaaacctccggccgtacaggccagcgcctcgta
ttggtgctgaagcgtgacgccgtgccgaaggtggtgctgaacaacctgtacaagcactcc
cagctgcagcagaccttcggtgccaacatgctggccctggtcgacggcgtgccgcgcacg
ctgagcctggacgccttcatccgccattgggtgaaccaccagctcgacgtgatcgcccgc
cgtaccgcatacctgaaacgtgaagccgaggaacgcgaccacatcctgcagggctacctc
aaggctctcgacatgctggacgaggtcatcgccctgatccgagcctccgaagacaccgat
accgcccgtaccggtttgatggagcttctggacatcgatcaggtgcaagccgatgccatc
ctagccatgcagctgcgcacgctgacccgcatgaaccgcgacaagatcgtggccgaacac
gaggaattgcagcgcaagatcgccgactacatcgacattcttgccaagccggaacgccaa
cgcaagatcatcggtgacgaactcgacgagattgtgggcaagtacggtgacgaacgccgt
accaagatcctgccgttctccggtgagatgaacgtcgaagacctgatcgccgaagagaac
gtggtggtcaccgtgacccactccggcttcatcaagcgcaccaaggccgacgaataccgc
gcccagcaccgtggcggcaagggcatcaagggcaccaagctgcgcgaggacgacgtggtg
gatcacttcttcctgacctccacgcacaactggctgctgttcttcacgaacaagggtcgc
gtctaccgtatcaaggcctatgagctgcccgagggttctcgtgattccaagggccagcac
gtggctaacctgctgcaattcgcgcccgacgagtccatccaggccgtgctgtccatcccg
aactacgaggtggccaagtatctggtgctcgccacccgttccggcaaggtcaagaagacc
ccgctggccgagtacgactccccgcgtcagggcggcctcatcgccgtgcgcctgatggcc
gacgagaacggcgagaatgccgacgagctgatcggtgccgcgctgtgcaacgccgaggat
gacatcatcttggtctccaagctcggcatgagcctgaagttccaggccaacgatgagcaa
ctgcgcccgatgggtcgtcagactgccggtgtgcagggcatgaagttccgcgagggcgac
gagctactggccatggatgtggtatggggcgactccgacaaggatctgttcgtagtgacc
aacgaaggcttcgccaagcgtacggccatcagcgaataccgcctgcagggccgtaacggc
ctgggcatcaaggccgtgcagctggtcgaaggccgcggctctctggtcggcgcgctcgtg
gtgtccgaagacgatcaggtcatggccatcatgaagtccggcaaggtgattcgttccaac
gtggacgaggtcaagcgcaccgggcgcaacacccagggtgttaccttcgccaagcctgat
aagggcgacgaaatcctttccatcgcacgcaacgaagaaaaggatgaccccgaagaggag
gtcgccgacaacggcactgccgaagcaggccagtcccccgccgaaccggtgaacgagtcc
aacgagaccgcacaatccggtgagaatgtgaacaacgtggacgaggcgtga
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