Bifidobacterium breve 12L: B12L_0133
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Entry
B12L_0133 CDS
T03118
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbre
Bifidobacterium breve 12L
Pathway
bbre03030
DNA replication
bbre03430
Mismatch repair
bbre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B12L_0133 (dnaX)
03430 Mismatch repair
B12L_0133 (dnaX)
03440 Homologous recombination
B12L_0133 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbre03032
]
B12L_0133 (dnaX)
03400 DNA repair and recombination proteins [BR:
bbre03400
]
B12L_0133 (dnaX)
Enzymes [BR:
bbre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B12L_0133 (dnaX)
DNA replication proteins [BR:
bbre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B12L_0133 (dnaX)
DNA repair and recombination proteins [BR:
bbre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B12L_0133 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHJ14937
LinkDB
All DBs
Position
182247..184901
Genome browser
AA seq
884 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGRLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICEKESIKPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAIDAVIDHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDRAESVLSDTAEAEDMDDLHRQAKALGLSALTAIADIINTTLGAMTGAISPRMRLELLA
ARLLAGSENGFVAPAAAPALGAPAPATGAVASAAPATRGAAGGFAGASRGGFVGASHGGF
AGAARNQAQTQTAPAAAAPAAPASPATNAAAPSSDSRSTDEKWNAAVAALPQAIREYVTR
DKVPTVAFGPNRKGLPCLSMTFDKPLSQHAFALAVDNSGKKAAIVVMDAVRQEFGADAVI
APAAVAANGERVESVKRLSPEQLAKVKQQIAMAKAGLAASSLGAGLGMHSGSEPKAQKPA
AEGNAEDADGSHRASGVTPGGTSNKPDLDDDDPWAKPAASSEAMGEPSASAGEPSVDGFA
PSNPDPASAQAPEERHKKHVAVPDMSDDVDPWATPAAPVAHAQDATANTQAGQAEQSAAS
TSSNVGAPAADSAAPTASADPWNQPVPPPAEPMGGPWNQPAASAPQAAPDPWNQPAPPQS
EPDPWNQPQGQAQRQTPSQSQGMPQSQNSGAADPWNQPMPPSPQPQVAAEDDEYSMSDQS
LGDATAMKMDDLKKLFEVKKVEEFAADDPKNPKNIQPAKKHTDD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtcgctatcgtccggacacctttgaaggtgtgatcggccag
gaccaggtcacggttcctttgatgcgagcccttgacgagggcaggctcacgcatgcctat
ttgttctccggcccgcgaggctgcggcaagaccagttccgcgcgtatcctggcccgttgc
gtcaactgcgccaagggcccaacctcgcatccgtgcggcgagtgtgaaagctgcaaggat
ctggccaccggaggcccgggatccatcgatgtggtcgaaatcgatgccgcctcacacaac
ggtgtggacgatgcccgcgaattgcgcgaacgcgccgggttcgcccccgcccgcgaccgc
tacaagattttcatcctcgacgaggctcacatggtcacgcagcagggcttcaacgcgctg
ctcaagatcgttgaggaaccgcccgagcatgtgatgttcatcttcgccaccaccgaaccg
gacaaggtgattggcaccatccgttcgcgtacccatcattacccgttccgtctggtgccg
caggaggtcatgggcccctatctggaaacgatctgcgagaaagagagcatcaagcctgag
cccggcgtgctgaaactcgcgatgcgtgccggcggcggctccatgcgagacaccctgtcc
gtgttggaccagctcatggtcggttccgtcgagggcgtcatcacccatgatgccgccgtg
gctctgcttggtttcactcctgaagcgttgatcggtgaggccatcgatgcggtcatcgat
cataacggcgaggccctgtacggcgtgatccagaaggtcgtggtcggcgggttcgaccca
cgacgattcgtggaggatctgctggcccgcgtgcgtgacctgctggtgctgactttggcg
ggcgaccgcgcggaatccgtgctgtcagacacggccgaggccgaggacatggacgacctg
caccgccaggccaaggcccttggactgagcgcgctcaccgccattgcggatatcatcaac
accacgctgggtgccatgaccggtgccatctctccgcgtatgcgactcgaattgctggcg
gcccgactgctggccggcagcgaaaacgggttcgttgcacccgctgccgctcccgcattg
ggagctcccgcgccagccacaggagctgtagcctctgccgctcccgctacgagaggtgca
gcaggtggctttgccggcgcatctcgcggcggtttcgtcggggcctcacacggtggattc
gccggcgctgcacgaaatcaagcacagacgcagaccgcgcccgcagccgccgcccctgct
gcgcctgcatctcctgctacgaatgctgcggctccaagctccgactcccgatccactgat
gaaaagtggaatgcagccgttgccgcattgccgcaggccatccgcgaatacgtcaccaga
gacaaggtgccgacggtggcattcggccccaaccgtaagggattgccctgcctgtccatg
accttcgacaagccgctcagccagcatgcgtttgcgctcgcggtggataacagcggcaaa
aaggccgcaatcgtggtgatggatgccgtacgccaggaattcggtgccgatgcggttatc
gctcctgcggccgttgcggccaacggtgagcgagtggaatccgtcaagcgcctgagcccc
gaacagttggccaaggtcaagcagcagattgcgatggccaaggcgggtctggccgcttcg
agtctgggagctggcctgggcatgcattccggcagtgagccaaaagctcagaagccggct
gctgaggggaacgccgaagatgcggatggcagccaccgagcctctggcgtaacgccggga
ggcacttcgaacaagcccgatttggatgatgacgatccatgggccaaacctgccgcatcg
tctgaggctatgggcgagccatctgcgtctgcaggtgagccgtctgttgatggttttgct
ccgagcaatccagaccctgcatctgcacaggcgcctgaagagcgccacaagaagcatgtc
gccgtaccggacatgagcgatgacgtggacccatgggcaacgccggcagcacctgtcgca
cacgcacaagatgcgaccgccaatacccaggccggccaagctgagcaatccgccgcgtct
acttcctcgaacgtgggtgccccggctgcggattctgctgccccaacggcatccgctgac
ccgtggaaccagccggtgcctccgcctgccgaaccgatgggtggcccgtggaaccagcct
gctgcgtctgcgccgcaagctgcgccggatccatggaatcaaccagctcctccgcaatcg
gaaccggatccgtggaatcaaccgcagggtcaggctcagcggcagaccccatcgcagagt
cagggtatgccgcaaagccagaactcgggcgctgctgacccgtggaaccagccaatgcca
ccgagccctcagccgcaggttgcggccgaggacgatgagtattcgatgagcgaccagtcg
cttggcgatgccacggccatgaagatggatgatctcaagaagctgttcgaggtcaagaag
gtcgaggagtttgcggccgatgacccgaagaacccgaagaacatccagcccgccaagaag
catacggatgactga
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