Bifidobacterium breve 12L: B12L_0162
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Entry
B12L_0162 CDS
T03118
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbre03032
]
B12L_0162
03400 DNA repair and recombination proteins [BR:
bbre03400
]
B12L_0162
Enzymes [BR:
bbre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B12L_0162
DNA replication proteins [BR:
bbre03032
]
Prokaryotic type
DNA Topoisomerases
B12L_0162
DNA repair and recombination proteins [BR:
bbre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B12L_0162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AHJ14963
LinkDB
All DBs
Position
217642..220692
Genome browser
AA seq
1016 aa
AA seq
DB search
MATKLVIVESPTKAHKIGDYLGKGYTVMASVGHIRDLAQPSQVPAADKPKFGKFGVDVND
GFKPYYIVDGDKKRTVSELKSALKGADELYLATDEDREGEAIAWHLVQTLKPKVPVRRMV
FHEITKDAINASLSKTRDVDSHMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRVQS
VATRLIVERERERMAFKRAPYWDVVATLAAPDALGERTEFAARMISLGGKRLAGSKDFGS
DGQLTPDGFAGSVRQLDEASATAVAEALKNADFTVMSMETKPYRRRPQPPFTTSTLQQTA
GNRLGMGSRAVMRAAQSLYENGYITYMRTDSVTLSQEAITAARNAVSYHFGDKFLSAEPK
QYATKTAGAQEAHECIRPAGSRFHDPDELASKLPIDQLRLYTLIWQRTLACQMADATGST
ATVRLSAPAGPADGEAVFQASGTVIEFPGFMKATGEGRKPKPAAADAAAADKSGAKATKS
DASESNASLPPMEVGQRVEASDIEPDGHETQPPARYTEATLVKTLEAKEIGRPSTYASII
STIMDRGYVYERGRALIPSWLAFSVTKLLETNFPKLVDYTFTAEMENGLDRIAHGEETGR
DWLTHFYFGSGEGAARNADEAHEGLQQQVAQLGEIDARAINTIDIGDGLHVRVGRYGPYL
EDMEHLDAEGNPKRASLPDTIAPDELTVEVAHDLTDNHSGGPRELGKDPVSGGTVEVRNG
RFGPYVALVPPEGAADSAATAPAGKKSSKKAAAAASRPRMASLFKTMSPESLSLEDALKL
LSLPREVGKYEETNAETGEVSECTVAANNGRYGPYLTKTSADGRSDTRSLGSEDEIFTVD
IDKAKELFAQPKYGRGRGRGAAKPPLRDLGNDPNTGKHVTIKDGRFGAYITDGETNRTVP
RQYTLESIAPEDAFRLLAEKRAAGPSTRGRRGRERAGAAKSGARGAKKGAASAATNAAEA
KRAGRRAEVKKLANKGWSNQRIAEKLSSTAATVKKDVDWLTANEGYERPAVIPKRG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaagctcgtgattgtggagtccccgaccaaggcccacaaaatcggtgactat
ctgggcaagggatacaccgtcatggcatcggtcggccatattcgcgaccttgcgcaaccc
agccaggtgcccgcggccgataaacccaagttcggcaagttcggcgtggacgtcaacgat
gggttcaagccctactacatcgtggacggcgataagaagcgcacggtaagcgagctgaaa
tccgccctgaagggcgccgacgagctctacctggcgactgatgaggatcgcgagggcgag
gccatcgcatggcatctggtgcagacgctcaagcccaaggtgccggtcaggcgcatggtg
ttccacgagatcaccaaggacgccatcaacgcctcgctaagcaaaacgcgcgatgtcgac
agccatatggtcgacgctcaggagacccgccgtattctcgaccgactctacggctacgag
ctgtccccagtgctgtggcgcaaggtggggccgggcctgtccgccggccgcgtgcagtcc
gtggccacccgactgattgtggagcgcgagcgcgagcgtatggcgttcaagcgtgcacct
tactgggatgtcgtcgccacgctggccgcgcctgacgctttgggcgagcgcaccgagttc
gcggcccgcatgatctcgttgggcggcaagcgactcgccggatccaaggacttcggctcg
gatggccagctgactcccgatggttttgcgggcagcgttcgccagcttgatgaggcttca
gccaccgccgtggccgaagcgctgaagaatgccgacttcaccgtgatgtcgatggagacc
aagccgtaccgccgccgcccgcagccgccgttcaccacctccaccctgcagcagaccgcg
ggaaatcgcctcgggatggggtctcgcgcagtgatgcgtgcagcacagagcttgtacgag
aacggctacatcacatacatgcgaaccgattcggtgacgctttcgcaggaggccatcacc
gccgcccgcaacgccgtctcctaccatttcggcgacaagttcctctccgccgagcccaag
cagtacgccaccaaaaccgctggcgcgcaggaagcccacgagtgtattcgcccggcggga
tcccgattccatgaccccgatgagctggcctccaagctgcccattgaccaactgcgcctg
tacacgctgatctggcagcgcacgctggcatgccagatggccgacgccaccggatcgacc
gccaccgtgcgcctgtctgcgccggctggccccgccgatggtgaggctgtattccaggca
tccggcacagtcatcgaatttcctggctttatgaaggccaccggcgagggccgcaagccc
aaacccgccgcagccgacgcggcggccgccgataagtcgggtgccaaggcgaccaagtcc
gatgcctccgaatccaatgcttccctaccgccgatggaggtgggccagcgggtcgaggct
tccgacatcgagccggatggccacgaaacccagcctccggctcgatacaccgaagccacg
ctggtcaagacgttggaagccaaggagatcggccgcccgtccacctatgccagcatcatc
tccacgattatggatcgcggctatgtgtatgagcgtggccgtgcgctgatccccagctgg
ctggcattctccgtgaccaagctgctggaaacgaacttccccaagctggtcgattacacg
ttcaccgctgagatggaaaacggcctcgatcgcattgctcacggcgaggagactggccgg
gattggctgacccacttctactttggttccggcgagggcgcggcccgcaatgccgacgaa
gcgcatgaaggcctgcagcagcaggtggcacagcttggcgagatcgacgcccgagccatc
aacaccattgacatcggcgacggcctgcatgtgcgcgttggccggtacggcccgtatctg
gaagatatggagcatctggatgccgaaggcaacccgaagcgtgcctccctgccggacacc
atcgcgccggacgagctgaccgtcgaagtggctcatgatctgaccgacaaccattccggt
ggcccgcgcgagctgggcaaggacccggtttccggcggcaccgtggaagtgcgcaacggt
cggttcgggccgtatgtggcgttggtgccgcctgagggtgccgccgattccgccgccact
gcgccggccggcaagaagagctccaagaaggccgcggccgctgcgtcgcgtccgaggatg
gcctcgctgttcaagaccatgagccccgaatcgctctcgttggaagatgcgttgaagctg
ctgagcctgccgcgcgaggtgggtaagtacgaggaaaccaacgccgagaccggtgaggtt
tccgaatgcacggtggccgccaacaacggtcgctatggtccgtatctgaccaagacgagc
gccgatggcaggtcggatacccgttcgttgggctccgaagatgagatcttcaccgtggac
attgacaaggccaaggagctgttcgcccagcccaagtacgggcgtggtcgcggacgtggc
gccgccaagccgccgctgcgtgatttgggcaacgacccgaacaccggcaagcatgtgacc
atcaaggatggccgctttggcgcttacatcaccgatggcgagaccaaccgcacggtgccg
cgccaatacacgctggagtcgattgcgccggaggatgcgttccgtctgcttgccgaaaag
cgcgcggctgggccctccacccgtggccgccgcggccgtgagcgtgccggtgccgcgaag
tcgggagccaggggagccaagaagggcgctgcttcggctgcgaccaatgccgccgaggcc
aagcgcgccggacgccgtgccgaggtgaagaagctggcgaacaagggctggtccaaccag
cgcatcgccgaaaagctcagctccaccgccgccaccgtgaagaaggatgtcgactggctg
accgccaacgagggctacgagcgccccgccgtaattcccaagcgtggttga
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