Bifidobacterium breve 12L: B12L_0423
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Entry
B12L_0423 CDS
T03118
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
Organism
bbre
Bifidobacterium breve 12L
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
AAA_22
UvrD-helicase
AAA_19
ATPase
AAA_25
GvpD_P-loop
DPRP
Motif
Other DBs
NCBI-ProteinID:
AHJ15211
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Position
547991..552088
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AA seq
1365 aa
AA seq
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MTTQWNPDELLDGIAQDGKARLVTGAPGAGKTEFALSVLTAGLRRFGGAGAVMVVPGRVV
ADLLGNRVIRDMGSSVQARPVTTLGAVAFRVIAASRAASGLPLPRLLNGAEQDALLRQVM
AVHMAHAAAGDDCAICALLREYFAQADWASLVQDADGAVPGGSTSADVFARGISDAFIAQ
LRDMLARLDELGVNPSGEAALLADVAQDARLLVQWRLAFALRREYIAAQSAASEGQYRLD
ASYLLVAGAREIHDAMASGRSEEQSDSWLASRGLPQLLVVDDAQDITLAGMRFLEELNHA
GTAIVLVGNPDEAVQTFRGSYPEYLMRQAVTGPMQAVEMTLPSADFASGETYASLVASRV
SLSIPSEEDEPLPLARRPGKLVSALDTGADIPSDDGTVQTGLYRSAREELDDVVWRMKRA
HLDHHIQWNDMVVIAHDNATVRTYGERLRRDGVPVRYSSVTRPLNSESFVQGLFALIELA
RLRAEGVASCTMSLAETASYVRTRVSTVMNGPLVTAGAKPGQGRPARLAPIESAMAALES
LAPIAGDKASLHGLISSWETLRESSVDGHERVVVDDSIIGFSADADLAFGADALYVMLAF
DDAQAPAENVLDAITAVLGADPQARAFTNLWTLVGKISRGLSNLPPEQRSRPSYALAVAW
NAAAITPVWQKLALANTPDGRAANDRLDVAMRLFQFAEDSTASRDIMGFIAQVRAMQVQA
DSLAHIGPVENAVTLTTPAGTAGRHWQYAWLPSLQQDVWPNLAGRNTMFGGEDLAELVLR
GTLNTADAAGHDPQFIAVLSSEKKSFLVALTRACRSVTVSAVWNDDLSPSDFLFGYMPEY
YPRDKQRARFTDVGEQTSESGLDLSGLDGDPRGLVTAARVIVATSEPDSSEARDAAETLA
VLAENGIAAANPDNWAFASALSRRDTSSAVSPASGSKQTEDDERTSGDDHAPLVTLSPSA
VDGLWACPVCWLLEHQFAGPQPGSVNAGFGTLIHAVAQQGSEEGLDRLDSDESARNAMGI
SDASSVQQRIEAVTKRMIVIYQEQRPDPESIADTRERYTAKRKDDSAADILANIASYFVL
SGTNTDAYLDKNVGKFEIGTLTKADCELSFAARFDLHDIVAAYNALPGMRPVDRDTLASM
MGFLVGGWPSGMRNDLTVRLSGRIDRMETRILADGSENIRLIDYKTGAAPTVKQIFNDLQ
LVCYQLGLVFPEEGLRGSAALANAPRIGQSALFHVAYNDAPARSYAPEGVFQPPLFTNGS
LNAEPFTDRAWYKDPAKFFDMPIPDSATPPAGVDAETWKQFVSLTGTQALWSLTMIARVF
YAAAASRSSVINAHPQATHVAYCRMTGVCPACAGKLDTVFETRQA
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcaatggaacccagacgaactgttggacggcatcgcccaagacggcaaggcg
aggctggtaacaggtgcgcccggagccggtaaaactgagtttgctttgtccgtactcacg
gcagggcttcgacgttttggcggtgccggggcggtgatggtcgtgcccggtcgtgtcgtc
gcggatttgctgggcaatcgagtgattcgtgacatgggctcgtctgtacaggccaggccg
gtcaccacgttgggggctgtggcttttcgtgtgattgcggcatccagggccgcatctgga
ttgcccttgccaagattgctgaatggtgccgaacaggatgcactgctgcggcaggtgatg
gccgtgcatatggcgcatgctgctgctggcgacgattgcgcaatctgtgcgttgcttagg
gaatactttgcccaagccgattgggccagtctggtgcaggatgccgatggagcagtgccc
ggaggttcgaccagcgccgatgtcttcgcccgtggaatttcagacgcgttcatcgcccag
ctgcgcgatatgttggcgcgcttggatgaactgggcgtgaatccttctggggaggccgcc
ttgttggcggacgttgcgcaggatgcgcgtctgctggtgcagtggcgcttggcgtttgcc
ttgcgtagagaatatatcgccgcgcagagtgcggcatctgaggggcaataccgtttggat
gcctcatatctgctggtggcgggcgctcgggaaatacatgatgctatggcaagcggccgt
tcggaggaacaatccgattcgtggttggcatcacgaggattgcctcagctgctggttgtg
gatgatgcccaagacatcaccctggccggcatgaggttccttgaagagctgaatcacgcc
ggtactgccatagtgctggtgggaaacccggacgaggcggtgcagaccttccgcggttcg
taccccgaatacctgatgaggcaagcggtgacgggaccgatgcaggccgtggagatgaca
ttgcccagcgcggatttcgcaagcggtgagacttatgcctcgctggtcgcctctcgcgta
tccctatcgattccttccgaagaggacgagccgttgcctcttgctcgtaggcctggcaag
ctggtgtccgcgctggataccggtgctgatatcccctcggatgatggcactgtgcagact
ggattgtatcgttccgcgcgcgaagagcttgacgatgtggtgtggcgcatgaagcgcgca
catctcgatcaccatatccagtggaatgatatggtcgtcatcgctcatgacaatgccact
gtgcgtacatacggggagcggctgaggcgcgatggcgtgcctgtccgatactcgtcggtt
acccgcccgctgaacagtgaatcgttcgtacaggggctgttcgccttgattgagttggcc
cggttgcgcgctgaaggtgtagcctcctgcaccatgagtctcgccgagaccgcttcctat
gttcgtacacgagtgtccacggtgatgaacggaccgttggtgacggctggggccaaaccc
gggcaagggcggcctgcacggttggcgccaatcgaatccgccatggcggcattggaatcc
ctggcgccgatagcgggggataaggcgtcattgcatgggctgatttcctcgtgggagacg
ttgcgagaatcgtccgttgacggtcatgagcgagttgtcgtagacgatagcattatcggt
tttagcgctgatgccgatttggcattcggtgccgatgcgctgtatgtgatgcttgccttt
gacgatgcgcaggctcctgccgagaatgtattggacgctatcaccgcagtgcttggcgcc
gacccgcaggctcgcgccttcacgaatctatggacgctggtcggcaagatatctcgaggg
ttgagcaatttgcctccggagcagcgtagcaggccaagttatgcgctcgccgttgcgtgg
aatgccgcggcaatcacacctgtatggcagaaattggcattggcgaacacaccagatggg
cgtgcggccaatgaccgacttgatgttgctatgaggctgttccaattcgctgaagattcc
accgccagtcgggacatcatggggttcatagcgcaggtgcgtgccatgcaggtacaggcc
gattcgctggctcatattgggccagtggaaaatgcagtgacgttgaccactccggctggt
actgcagggcggcattggcagtatgcctggttgccgtctcttcaacaggatgtatggccc
aatcttgccggccgcaacaccatgttcggtggtgaggatctggcggaactcgtgttgcga
ggcaccttgaacaccgccgatgccgctggccatgatccccaattcattgcggtgctatcc
agtgagaagaaaagtttcctggtggcgttgaccagagcgtgccgttccgttaccgtcagt
gccgtatggaacgacgacctcagcccatcggacttcctgttcggatatatgccggaatac
tatccgcgggataagcagcgggcacggtttacggacgtgggggagcagaccagcgaatca
gggcttgatttatctggattggatggcgacccacgcggattggtgaccgcagcgcgcgtg
attgtggcgacttcggaacctgactcgagcgaagctcgtgatgcggctgaaacgctcgca
gtgttggctgaaaatggcatagccgccgctaatcctgacaactgggcgttcgcctcggcc
ttatcaagacgagacacatcgtctgccgtatcgcccgcgtctggcagcaagcagacggaa
gatgatgagcgtacgtcaggcgatgatcacgcacctctcgttacgttatcgccttcggcg
gtggacggtctctgggcttgcccggtgtgctggctgttggagcaccaatttgcagggcct
caacccggctcggtgaacgcagggttcggcacccttatccacgcggtcgcacagcagggc
agcgaagagggactggatcgtctcgactccgatgagtcggcacgcaatgccatggggata
agcgatgcgtcatcagtgcagcagcgcatcgaagctgtgaccaagcgcatgattgtcatc
tatcaggaacagcgcccggatcccgaatcgattgcggatactcgggaacgctacaccgcc
aagcgcaaagatgactccgccgccgatatcctggccaacatcgccagctattttgtgctc
agcggcaccaataccgatgcctatttagacaagaatgtcggcaaattcgagattggcacg
ttgaccaaggccgattgcgaattgtcgttcgccgcgcgattcgacctgcatgacattgtg
gctgcttataacgcattgcctggtatgaggccagtagaccgcgataccttggccagcatg
atgggcttcctagtgggtggatggccgtcaggtatgcgtaacgatctgaccgtgcgcttg
tccggtcgcatcgatcgcatggaaacccgtatacttgcggatggcagtgagaacattcgc
ttgattgactacaaaaccggtgcggcacctaccgtcaagcagatattcaacgacttgcag
ttggtgtgttatcagctggggctggtctttcccgaagaggggctgcgagggagcgcagca
ttggctaatgcccctcgtatcgggcagagcgcgctattccatgtggcatacaacgatgcg
ccggccagaagctatgctccggaaggcgtgttccagccgccgctctttaccaacgggtcg
ctgaatgccgagccgttcaccgaccgcgcatggtataaggatcccgccaaattcttcgat
atgccgataccggattcagctacgccgcctgcaggcgtggatgccgagacctggaagcag
ttcgtctcgctgaccggcacccaagcattgtggtcgctgacaatgatcgcccgtgtattc
tacgcggccgcggccagccggtcgtccgtcatcaacgcccacccgcaggcaacgcatgtg
gcttattgccgtatgaccggcgtctgcccggcctgtgcaggcaagctcgataccgtgttt
gaaacgaggcaggcatga
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