Bifidobacterium breve 12L: B12L_0729
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Entry
B12L_0729 CDS
T03118
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbre03016
]
B12L_0729
Enzymes [BR:
bbre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B12L_0729
Transfer RNA biogenesis [BR:
bbre03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B12L_0729
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHJ15492
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All DBs
Position
909361..910662
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AA seq
433 aa
AA seq
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MSDVHDTEPRLLKEPRGGVPDVTSTIEGYHHVCEALADASGSLAADAERASGFRYGHEDW
LIQCKREGAGIALLDPIALTQSGADWNEFNDAVGDATWILHDSLMDLPGFADLGLQPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LENLMRRDLRAAGKDEWAEEEFTHALSEGLAPRKPHPVPWLRISRITQLSRDPQGLAIAK
SLWQERDKLARQHDIAPSLLLSDSSIIEAATRKPHNAAQFRALRSLNERVRIRTGTEQDK
MFERYAPIQRAVKPKVWKEAIDRAVALRPSQWPSMPAPAPDENGIVNAPRSMRLWQQRHP
DRYDRLQRVRRVITSIAEDTRTPAEMIIKPQILRNLCWVENPAEVDVEEFLIAQGARNWQ
VKLIAPSVSGVIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgtccatgacaccgaaccacggttactgaaagagccgcgcgggggagtgccg
gatgttacctcgacgattgaaggctatcatcacgtctgcgaagcgttggctgatgcttct
ggctccttggccgccgatgccgaacgcgcatccggattccgttatggccacgaggattgg
ctgattcaatgcaaacgagaaggtgcgggcatcgcgttgctcgaccccatcgccttgacc
caatctggtgccgactggaacgaattcaatgatgccgtgggcgatgccacttggattttg
catgattccctgatggatttgccgggattcgctgatctgggacttcagccgaaggcgctg
ttcgacacggagatcgccgcgcgtctgctcggtttgcatcgattcggattagccgccgtc
actgaacattatcttggcatcactttggccaaggaacattctgcggctgactggtcctac
cgcccgctgccacgagactggcgcaactatgcggcgcttgacgtggaagtgctgatcgag
ctcgaaaacctgatgcgccgtgatctgagagccgccggcaaggacgagtgggctgaagag
gaatttacccatgcactgtccgaaggactcgcccctcgcaaaccccatccggttccgtgg
ctgcgcatttcccgcatcacccagctgagccgtgatccgcagggattggccatcgccaag
tctctgtggcaggagcgggacaaactggcccggcagcatgacattgcccccagcctgctg
ttgtctgattcctcgattattgaggctgcgacgcgcaagccgcataatgccgcccagttt
cgggctttgcgttcgctcaatgaacgtgtgcgcattcgcaccggtaccgagcaagacaag
atgtttgagcgctatgccccaatccagcgtgccgtcaaacccaaggtctggaaagaggcc
attgatcgggccgtggcgctgcgcccttcccaatggccgagtatgccggcacccgcgccg
gacgagaacggcatagtgaatgcaccgcgttcgatgcgactctggcagcaaaggcacccc
gaccgatatgaccgactgcaaagggtccgtcgcgtgatcacttcgatagccgaagatacg
cgtacaccggccgagatgattatcaagccgcagattctgcgcaacctatgctgggtggag
aatccggccgaagtggacgtcgaggagttcctgatcgcgcagggcgcaagaaactggcag
gtgaaactcattgcaccgtccgtaagtggcgttattatgtag
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