Bifidobacterium breve 12L: B12L_0999
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Entry
B12L_0999 CDS
T03118
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bbre
Bifidobacterium breve 12L
Pathway
bbre00061
Fatty acid biosynthesis
bbre00071
Fatty acid degradation
bbre01100
Metabolic pathways
bbre01212
Fatty acid metabolism
bbre02024
Quorum sensing
bbre04146
Peroxisome
Module
bbre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
B12L_0999
00071 Fatty acid degradation
B12L_0999
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B12L_0999
09145 Cellular community - prokaryotes
02024 Quorum sensing
B12L_0999
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bbre01004
]
B12L_0999
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbre04147
]
B12L_0999
Enzymes [BR:
bbre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
B12L_0999
Lipid biosynthesis proteins [BR:
bbre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
B12L_0999
Exosome [BR:
bbre04147
]
Exosomal proteins
Exosomal proteins of breast milk
B12L_0999
Exosomal proteins of breast cancer cells
B12L_0999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DegS
DUF2452
Motif
Other DBs
NCBI-ProteinID:
AHJ15748
LinkDB
All DBs
Position
complement(1207391..1209472)
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AA seq
693 aa
AA seq
DB search
MREHVEEPRYVTTDEDTVFSLLVKRAARTPDDTIAEWQDDDTHQWRGATATEMLSRVREV
AKGLLGLGVKAGSMVLIYSPTCYEWGVADFACAAIGAVVVPVYETDSAKQTAGIVEEVDP
VIAFAGGFQHAQTLEQIRAAHPGLKYVFNFKADGLDAVADFGQNVSDEILDAAIARIKAD
DLLTVVYTSGSTGKPKGAMLSNRNYTHIVLNGYEILRGMLYDDNRLLLFLPLAHCFARYI
QYVCIGGCGVVGYIPDAKHLLADIRSFKPTYLLGVPRVFEKVYNAASQKAGAGVQGHIFA
LSVKHFVKWSKDEQSGHGHSFIDRMAHSFFMATVGKSIRSALGPNLKWLACGGAPLNVDL
AHFFNGMDDITFIQGYGMTETAAPMLVNWEDDNEVGSVGKPGPGMGVRLGEDDEIELTGP
NVFLGYYKQPELTAQAMTADGWIKTGDLGRIEDRGFTYITGRKKDIIITAGGKNISPAPM
EDVIDTCPIVAHAVVVGDGKPFVSALIELDPEMLHSWLEGQGLDPDMSLAEASGNDAVRA
FVQQYIDQANANVSRAESVRKFAILDEEFNQEHGTLTPSMKVVRPKVLQRYTAIIEEDLY
APKPSNKPLPATAKIIDSTVATVKKSSEQVKQASEQVKQASEQMKASVSDSIASVSEKIK
KTKNEADEAEEGESAEATADELPDQSAGENNEE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaacatgttgaagaacctaggtatgtcaccaccgacgaggacacggtgttctct
ctgctggtcaagcgtgcagcccgcacgccggatgacaccattgccgaatggcaggatgac
gatacccatcaatggcgtggcgccactgcaacggaaatgctcagccgtgtccgcgaggtg
gccaagggactgctcggcctcggcgtgaaggccgggagcatggtgcttatctactcgccc
acctgttacgagtggggcgtggctgattttgcctgtgcggctatcggagcggttgtggtt
ccggtgtatgagactgattccgccaagcagactgccggcattgtggaagaggtcgatccg
gtcatagcctttgccggtggtttccagcatgcgcaaacgttggagcagattcgcgctgca
catccgggcctgaaatatgtgttcaacttcaaggccgatgggctcgatgcggttgccgat
ttcggacaaaacgtatccgacgagatcttggacgctgccattgcgcgcatcaaggccgac
gatttgctgactgtggtctacacctccggttccaccggcaagcccaagggggccatgctc
tcgaatcgcaactacacgcatattgtgcttaacggctatgagattctgcgtggcatgctc
tatgacgacaatcgcctgctgctcttcctgccgcttgcgcactgcttcgcgcggtacatc
caatatgtatgcatcggcggctgcggtgtggtcggatacattcccgatgccaagcatctg
ctcgccgacattcgcagcttcaaacccacctacctgcttggtgtgccccgtgtgttcgag
aaggtatacaacgccgcctcgcagaaagccggcgcgggcgttcaaggccatatttttgcc
ctgtccgtcaagcacttcgtcaagtggagcaaggacgagcagtcggggcatggccattcg
ttcatcgaccgtatggcgcattccttctttatggccacagtcggcaagtcgattcgttcc
gcccttggcccgaatctcaaatggctggcctgcggtggtgctccgctgaacgtggatctg
gctcatttcttcaatggcatggacgacatcacattcattcagggatacggcatgaccgaa
accgccgctccgatgctggtcaactgggaggatgacaacgaggtcggatcggtcggcaag
cccggtcccggtatgggcgtgcgtcttggcgaggatgacgaaatcgagctcaccggtccg
aacgtgttcctcggctattacaagcagccggaactcaccgcccaggcaatgaccgccgac
ggttggatcaaaaccggtgatcttggacgtatcgaagaccgtggtttcacatacatcacc
ggccgtaagaaagacatcatcattaccgccggcggcaagaacatcagcccggcacctatg
gaagatgtcatcgacacctgtccaatcgtcgctcacgcggtggtggtcggcgatggtaag
cccttcgtttccgcactgattgagcttgaccctgagatgctgcattcgtggctggaagga
cagggccttgaccctgatatgtcgctagccgaggccagcggcaacgatgcggtgcgcgct
ttcgtgcagcagtacatcgatcaggccaatgccaatgtgtcccgcgccgaatccgtgcgc
aagttcgcgattctcgacgaggaattcaatcaggaacatggcacgctcaccccgagcatg
aaggtggtgcgtcctaaggtgctgcagcgttacacagccatcatcgaagaagacctgtac
gcgcccaagccttccaacaaaccattgccggccacggcaaagattatcgacagcacggtg
gcaaccgtcaagaaatcttccgagcaggtcaagcaggcctcggaacaggtcaagcaggct
tccgagcagatgaaggccagcgtgtctgattcgattgctagcgtgtcggagaaaatcaag
aagacgaagaacgaagccgatgaggctgaggaaggcgagtccgcagaggcaactgccgat
gagctgcctgatcagtcagccggcgagaacaacgaggagtaa
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