Bifidobacterium breve 12L: B12L_1170
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Entry
B12L_1170 CDS
T03118
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbre03036
]
B12L_1170 (xerD)
Chromosome and associated proteins [BR:
bbre03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
B12L_1170 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Parvo_NS1
PaaX-like_Fer-like
Motif
Other DBs
NCBI-ProteinID:
AHJ15912
LinkDB
All DBs
Position
complement(1406207..1407136)
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AA seq
309 aa
AA seq
DB search
MGVDGFGTLREQFLVHIGIERGLAKATVSAYESDLNKYVAWLQTHGITKPDDIAKQDVED
YIAALDADGESARSKARRLASIHEFHRFALAQHAVSADVAASVKAPKGASVLPDVLSIDE
VSRLLDAAAVGGSTDPVVLRDKALLEFMYATGCRVSEAVGTNLDDIDLEEKVVRLMGKGS
KQRLVPLGSYARNSVVVYLNAGRGELERRSTAKVPERRALFLNKRGKRISRQSVWEIVKT
AGERAGITKPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQIYTHVSPEALIET
YLTAHPRAR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgacggattcggcacactgcgggagcagttcctcgtgcatatcggcatcgaa
cggggactcgccaaagccaccgtctccgcctacgaatccgacctcaataaatatgtcgcc
tggcttcagacccatggcatcaccaagccggatgatatagccaaacaggatgtcgaggac
tatatcgccgcacttgatgcggacggggaatccgcgcgatccaaggcccgccgattggcc
tccatccacgaatttcaccgttttgccttggcccagcatgcggtatcggcggatgtggcc
gcttcggtcaaagcccccaaaggggccagtgtgttgccggacgtgttgagcattgacgag
gtgtcccggctgctggatgccgcagccgtcggcggttccaccgacccggtggtgttgcgg
gacaaggcccttctcgaattcatgtacgccaccggatgccgcgtctcggaggccgtgggc
acgaatctggacgacatcgaccttgaggagaaggtcgtccgattgatgggcaaggggtcc
aagcaacgtctggtgccgttgggcagttatgctcgtaactcagtcgtggtgtatctcaac
gcgggtcgaggcgagctggaacgcagatcaacggccaaagtccctgagcgtcgagcgctg
ttcctgaacaagcgaggcaaacgcatctcacgccaatcggtatgggaaatcgtcaaaaca
gcgggggagcgggccggcatcaccaagccgctgcatccgcatacgctgcggcattcgttc
gccactcatctgattcagggcggtgcggacgtgcgcaccgtacaggaactgctgggccat
gccagcgtcaccaccacgcagatatatacgcacgtgagtcccgaggctctgatcgaaacg
tatctcaccgcgcatcccagagcgcgttag
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