Bifidobacterium breve 12L: B12L_1370
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Entry
B12L_1370 CDS
T03118
Name
(GenBank) Activator of (R)-2-hydroxyglutaryl-CoA dehydratase
Organism
bbre
Bifidobacterium breve 12L
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
Peptidase_S64
Motif
Other DBs
NCBI-ProteinID:
AHJ16105
LinkDB
All DBs
Position
complement(1644867..1649981)
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AA seq
1704 aa
AA seq
DB search
MVDIVTDASVKPASHPKPLRVGLDIGSTTVKAVVLDQSDSLKDTLFSDYRRHHANVRATV
AGLLADIHKKLVELGRGDEPIRLSITGSGGLALADNLHVPFIQEVIAETEAIDKEYPQAD
VIIELGGEDAKITYLKPTPEQRMNGSCAGGTGAFIDQMSTLLDTDAAGLNEMAKSYENLY
PIASRCGVFAKTDLQPLINDGAAKPDLAASIFTAVATQTIAGLASGRPIHGTVIFLGGPL
FFMSELRAAFQRALEGKVDEFIVPTDAHLYVAYGSALQADMDSDDQGHHFEAYTCDEILK
RLDELKNLPSNTPTMPPLFPTEADREDFNKRHHKEHIHIGTLEGAHGPHFLGIDAGSTTI
KATLVNDDREIVWSSYANNEGSPLTAAINIVKKIQSELPEGAWIARSCATGYGEGLITTG
LHLDEGVVETMAHYRGAEMVSPGVTAVIDIGGQDMKYLAITDGVIDSIAVNEACSSGCGS
FLQTFAMSMGLTIQEFTQKALASTHPVDLGSRCTVFMNSSVKQAQKEGASIEDIAAGLCY
SVVRNALYKVIKLRDSGELGDTVVVQGGTFLNDAVLRAFELLTERQVTRPNIAGLMGAFG
AALTARMHYQDEADHLDVVVKADGSEEQSEAESALKSEPKAAAFKKTEPAKPEVHVVVVD
GVTHTASSILTGDALDNMSMTTERDVCKLCQNHCKLTITTFSDGSRFVTGNRCERGGDAK
KKRSDRPNLYDYKYKRCFAYRRLTDKKATRGEIGIPRALNMYENYPFWFTLLTSLGFKVM
ISGRSSHELFETGIESIASENICYPAKLVHGHIKWLINKGIKTIFYPCVSYEENLVPNTD
NHYNCPVVANYPLVVGANMPELREDDVRYMHPYFNLANHELMVDRIVEEFAWANVTREEA
ETAVKAAYAEDKVFKHDVQQEGLTALAYMKEHNCRGIVLAGRPYHIDPEINHGIPETICS
LGMVVLSEDSICELQPGEKLNLTEFLSEGEADPRSKNAAGFRHVGDRTVTKMPLRVTNQW
AYHSRLYAAAHFVASYPGLELVQLNSFGCGLDAITTDQVAEILADKADVYTLLKIDEVSN
LGAAKIRLRSLKAAVEEREANKAREEAAAKALEDKQAAAERAAEEAKVKAESDLEAAKAV
LAEAQAAVEAAQKKVDAEAKAVQDAAKTAQSAQSASVQGPKPTGFRRTGSTAPTPGRQIL
LDTTMAANPKLTKSMREASKRAAERDLQAAVAHKNGTSDGTTGVANAKNAKKSGHNNATM
SRYAHREKFVKDMKKNYTIVGPQMSPIHMSLVEAVIRSGGYKFDILKHASRGDVETGLKY
VNNDACYPAIMVVGQLIDAILEGKYDPDHVALAITQTGGMCRATNYFGLIRKALVDAGYP
QIPVIAISTQGLEDNPGFKATPPLLHRTIKALILGDLLMKCLYRVRPYEVEKGSANKLYE
LWDTIVRETIEHHGYSKTAAKTPSIKKGYLPYNVLAKEIVKSFDALPLRDIPRKVRVGVV
GEILVKYQPDANNHVVDVIESQDCEAVVPGIMEFMTTRPYITDWNEKNLGMGGNKTLYAL
MRKGLDLYNAPIKAALATSHGKFKQDEPMPELVKKAAEVTSIGVQAGEGWLLTAEILELI
EQGCPNVICAQPFACLPNHVTGRGMFGKIRRLHPEANIVSIDYDPGASEANQLNRIKLMI
AAAKKAHNAKFAETGEPQGFTSAD
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggttgacatcgtcactgacgcgagcgtaaagcccgcttcacacccgaagcccctgcgt
gtgggattggacatcggttccaccaccgtcaaggccgtggtgcttgatcagtccgattcc
ctgaaagacaccctattttccgattaccgacgtcaccatgccaatgtgcgtgccaccgtt
gccggcctgctcgcggacatccataagaagctcgtggaactaggtcgaggcgatgaaccg
attcgcctgtctatcaccggctccggcggtctggcgcttgctgacaatctgcatgtgcct
ttcattcaggaggtcatcgccgaaaccgaggcgattgataaggagtacccgcaagccgac
gtcatcatcgagctcggcggcgaggacgccaaaatcacctacctgaaacccacccctgaa
cagcgtatgaacggttcgtgcgcaggcggcaccggcgcgttcatcgaccagatgtccacg
ctgcttgacaccgacgccgcaggcctcaacgagatggccaagagctacgagaacctgtat
ccgatcgcctcgcgttgcggcgtgttcgccaaaaccgatctgcagccgctgatcaacgac
ggcgcggccaagcctgatctcgccgcctctattttcaccgcagtggccacgcagaccatc
gccggcctggcttctggccgcccgatccacggtaccgtcatcttcctcggcggcccgctg
ttcttcatgtccgaactgcgcgccgccttccagcgtgcccttgaaggcaaggtcgacgag
ttcatcgtgccgaccgacgcccacctgtatgtggcctacggttcggcattgcaggccgac
atggattccgacgatcagggccaccatttcgaggcctacacctgcgatgagatcctcaag
cgtttggacgagctgaagaacctgccttccaacacgcccactatgccgccgctgttcccc
accgaggccgaccgcgaggacttcaacaagcgtcaccataaggaacacatccacatcggc
accctcgaaggcgcgcatggcccgcacttcctgggcatcgacgccggttccaccaccatc
aaggccacgctcgtcaacgacgaccgtgaaatcgtctggtccagctacgccaacaacgaa
ggcagcccgctgaccgccgccatcaacatcgtcaagaagatccaatccgagctgcccgaa
ggcgcatggatcgcacgctcctgcgccaccggttacggcgaaggcctcatcaccaccggc
ctgcacctggacgagggcgtggtggagaccatggcccactatcgtggtgccgaaatggtc
agccccggcgtcaccgccgtcatcgacatcggcggccaggacatgaaatatctggccatc
accgacggcgtcatcgactcgatcgccgtcaacgaagcctgctcgtccggctgcggctcg
ttcctgcagaccttcgccatgtctatggggctgacgattcaggaattcacgcaaaaggct
ttggcatccacccatccggtggaccttggctcgcgttgcactgtgttcatgaactcctcg
gtcaagcaggcgcagaaggaaggcgcgtccatcgaggacatcgccgcagggctgtgctac
tccgtggtgcgtaacgccttgtacaaggtcatcaagctgcgtgattccggcgaactcggc
gacactgtggtggtccagggcggtacgttcctcaacgacgccgtgctgcgcgccttcgag
ctgctcaccgaacgtcaggtcacccgcccgaacatcgccggcctcatgggcgcgttcggc
gccgccctgaccgcccgcatgcactatcaggatgaggccgaccacttggatgtggtggtt
aaggccgatgggtccgaggaacagtccgaggctgagtccgcactcaagtccgagcccaag
gccgcagccttcaagaagaccgagccggccaagcccgaagtccatgtcgttgtcgtggac
ggtgtgacccacaccgccagctccatcctgaccggcgacgcactcgacaatatgagcatg
accaccgagcgtgacgtgtgcaagctgtgccagaaccactgcaagctcaccatcaccacg
ttctctgatggttcgcgcttcgtgaccggtaaccgttgcgaacgcggtggtgacgccaag
aagaagcgttccgaccgtccgaacctgtacgactacaagtacaagcgttgcttcgcctac
cgccgtttgaccgacaagaaggccactcgtggcgagatcggcattccgcgcgccctcaat
atgtacgagaactacccgttctggttcacgctgctcacctcgctgggcttcaaggtgatg
atttccggccgtagctcccatgaactgttcgagaccggcatcgaatccatcgcttccgaa
aacatctgctacccggccaagctggtccacggccatatcaagtggctgatcaacaagggc
atcaagaccatcttctacccgtgcgtgagctacgaggagaacctcgtgcccaacacggac
aatcattacaactgcccggttgtggccaactatccgctcgtcgtcggcgccaacatgcct
gagctgcgcgaggacgacgtgcgttacatgcacccgtacttcaaccttgccaaccatgag
ctcatggttgaccgcatcgtcgaagagtttgcgtgggccaacgtgacccgcgaagaggcc
gaaaccgcggtcaaggccgcctacgccgaagacaaggtcttcaagcatgacgtgcagcag
gaaggtttgaccgcgcttgcctatatgaaagagcacaactgccgaggcatcgtgctcgcc
ggtcgtccctaccacatcgaccccgaaatcaaccacggcatccccgaaaccatctgctcg
ctcggcatggtggtgctctccgaggattccatctgcgaattgcagccgggggagaagctc
aacctcaccgaattcctttccgagggcgaagccgatccgcgttccaagaacgccgccgga
ttccgccacgtgggagaccgcacggtcaccaagatgccgttgcgcgtcaccaaccagtgg
gcctaccactcccgcctgtacgcggccgcacacttcgtggcctcgtatccgggcctcgag
cttgtgcagctcaattccttcggttgcggcctcgacgccatcaccactgatcaggtggcc
gagattctggccgacaaggcggacgtgtacacgctgctcaagattgacgaggtctccaac
ctgggtgcagccaagattcgactgcgctcgctcaaggccgccgtcgaggaacgcgaagcc
aataaggctcgtgaagaagctgctgccaaggccttggaagacaagcaggccgctgctgaa
cgtgccgctgaagaggccaaggtcaaggccgagtccgatcttgaagcggccaaggccgta
ctcgctgaagcgcaggccgccgttgaagccgcgcagaagaaggtcgatgctgaggccaaa
gctgtgcaggacgccgccaagacggcacaatctgcacagtctgcgtccgtacagggtccc
aagcccaccggcttccgcaggaccggttccaccgcgccgactccaggccgtcagattctg
ctcgatacgaccatggccgccaacccgaagctcaccaagtcgatgcgtgaggcctccaag
cgtgccgccgaacgcgacctacaggccgcagtcgcccacaagaatggcacttcggacggc
accaccggcgtggcgaacgccaagaatgccaagaagtccggccacaacaacgccaccatg
tcccgatacgcgcatcgtgagaagttcgtcaaggacatgaagaagaactatacgattgtt
ggccctcagatgagcccgattcatatgtccttggtcgaagcggtgattcgttccggtggg
tacaagttcgacatcctgaagcacgcgagccgtggcgatgtggaaaccggcctcaaatac
gtgaacaatgacgcctgctacccggccattatggtcgtcggccagctcatcgacgcgatt
ctggaaggcaaatacgatcccgaccatgtagcgctcgccatcacccagaccggcggcatg
tgccgtgcgaccaactacttcggcctgatccgcaaggctttggtcgatgccggctatccg
cagattccggtcatcgccatttctacccagggcctcgaagacaaccccggtttcaaggcc
accccgcccctgctgcaccgtaccatcaaggcgctgattctgggcgacttgctcatgaag
tgcctctaccgcgtacgcccgtatgaggtggagaaaggttcggccaacaagctgtacgag
ctgtgggacaccatcgtgcgtgagaccatcgagcatcacggctattccaagaccgcagcc
aagacgccgagcatcaagaagggctatctgccgtataacgtgctggccaaggagatcgtg
aaatcctttgatgcattgccgctgcgtgatattccgcgcaaggtgcgtgtcggcgtggtc
ggcgagattcttgtcaagtaccagccggacgcgaacaaccatgtggtcgacgtcatcgaa
tcccaggattgcgaggccgtagtgcccggcatcatggaattcatgaccacccgcccctac
atcaccgactggaacgagaagaacctcggcatgggtggcaacaagacgctctacgccttg
atgcgcaagggtcttgacctgtacaacgcgcctatcaaggccgcactggccacctcgcac
ggcaagttcaagcaggacgagccgatgcccgagcttgtcaagaaggctgctgaagtcacc
tccatcggtgtacaggccggcgagggctggctgctgactgctgagattctggagcttatc
gaacagggttgcccgaatgtgatttgtgcgcagccgtttgcctgcctgcccaaccatgtg
accggccgtggcatgttcggcaagattcgtcgtctgcatccggaagccaacatcgtctcc
atcgattacgatccgggtgcctccgaggccaatcagctcaaccgtatcaagctgatgatt
gccgctgccaagaaggcccacaacgccaagttcgccgagaccggcgagccgcagggcttc
acctccgcggactga
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