Bifidobacterium breve 12L: B12L_1383
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Entry
B12L_1383 CDS
T03118
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bbre
Bifidobacterium breve 12L
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbre03400
]
B12L_1383
DNA repair and recombination proteins [BR:
bbre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
B12L_1383
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
PNP_phzG_C
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AHJ16118
LinkDB
All DBs
Position
complement(1667633..1668106)
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AA seq
157 aa
AA seq
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MSRKKQPVEKYERGTRSYTMSHIRGKDTKIEVLVRSYLFRRGLRFRKNDKRYPGHPDVVL
PKYHTIVFVNGCFWHMHEGCSKHSMPKSNVEFWQAKLLRNHNRDIAQRAELEASGWRVIT
VWECELTKAARDGRLARLYEQIVCPSGFPLEGSCRRK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgtaagaagcagccagtggaaaagtatgaacggggcacccgctcgtacacgatg
tcgcatattcgcggcaaagacaccaaaatcgaggtgctggtacgcagctatctattccgc
aggggcctgagattccgcaagaacgacaagcgctacccgggccatccggacgtggtactg
ccgaaataccataccatcgtgttcgtcaacggctgtttctggcatatgcatgaaggctgt
tccaaacattcgatgccgaagtcgaatgtggaattctggcaggcgaaactgttgcgcaac
cacaatcgagacatcgcccagcgcgccgaattagaggcctccggctggcgtgtgatcacc
gtgtgggagtgcgaattgacaaaagccgcacgagacgggcgtctcgcacggctatacgaa
cagattgtgtgtccttctggcttcccgctggaggggagctgtcgccgcaagtga
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