Bifidobacterium breve 12L: B12L_1685
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Entry
B12L_1685 CDS
T03118
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbre
Bifidobacterium breve 12L
Pathway
bbre00300
Lysine biosynthesis
bbre00470
D-Amino acid metabolism
bbre01100
Metabolic pathways
bbre01110
Biosynthesis of secondary metabolites
bbre01120
Microbial metabolism in diverse environments
bbre01230
Biosynthesis of amino acids
Module
bbre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B12L_1685
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B12L_1685
Enzymes [BR:
bbre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B12L_1685
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHJ16408
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Position
complement(2012328..2013950)
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AA seq
540 aa
AA seq
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MPISPIWPAATAVNANGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRVAAEAF
NTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
DEIALAIEQGFAKIVVDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHED
QKFGVPLLAAGADAAVLDVLNNLTDVTPAATNARIAESDVNAGNDHPQSTAPIVPASGSG
KPARELRYDVKYPYDLSHEEVSDTDKVLAAAMEAIADGPSIAVLKTILANQDVLELVGAH
SHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDDEDSMDIDVE
LTRLAVSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSAGNPI
DERVYVSVDGGMSDNIRPALYGADYTARLDNRTGSTETMLARVCGMHCESGDIVVHEVRL
PADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDDLLDLDQG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttctccaatttggccggccgccacggccgtgaatgccaatggtgccattgca
tttcatggccgcaccgccgaatccctgttggacgagtttggctcgccgctttacctcatc
gataccgatgaggtatcggcccgtgccaagcacttcgtacgcgttgcagccgaggcattc
aacacctccaccacgcacgtgagctttgccggcaaggcgttcctgtccaaggaaatcgtg
cgactggtcgccgaggctggcatgtttgtggacacctgcacgatgggggagatgcgaatc
gccctcgctgccggtgtgcccggccgccgcctagtgctgcatggcaacaacaagtccgat
gatgaaatcgcgctggccatcgaacagggcttcgccaaaatcgtggtcgatgagcctaat
gagccggagcgcatcgccgccatcgcccgtaaactcggcaagcgtgcccgcgtgatgctg
cgtgtcactgtcggcgtgcatgccggtggtcacgaatacatctccaccgcccacgaggat
cagaagttcggcgtcccgctgctggcggccggagccgacgccgcagtgctcgacgtgctg
aacaacctgacggacgtgacacctgccgcgaccaacgcgcgtattgcggagtcggacgtt
aatgctggcaatgaccaccctcagtcgactgcgccgatagttcccgccagcgggagcggc
aaaccggcacgcgaactgcgttatgacgtcaagtatccgtacgacttgagccatgaggaa
gtctccgatacggataaggtacttgccgccgcgatggaagccatcgcagacggtccgtcc
attgccgtgctcaagaccatcctggccaatcaggatgtgctggaactggtcggtgctcac
tcgcatatcggctccaacatccacgacgcggatgccttcatccacgccgccaagcgcatg
atgctgctgcgcaagaccctgtgggccaccgacgcctacatcctgcccgaaatcgatctc
ggcggtggttactccgtggcctacaccgacgacgaagattccatggacatcgatgtggag
ctcactcgtctggccgtctcggtcagcgacaccaatcgtgctctgggcatgcccgctccg
gccatcagcttcgagcccggccgttacatcgtggctccagccggcgtgaccctgtatcgt
gtaggcaccatcaagcatgtgcacctgagcgatgccaaagacagtgccggcaacccgatt
gacgagcgtgtgtatgtgtctgtggatggcggcatgtccgacaatatccgtccggcactg
tacggagccgattacaccgcacgtttggacaaccgaaccggctctactgagacgatgctt
gcccgcgtgtgcggcatgcattgcgaatccggcgatatcgtggtccatgaggtgcgtttg
cccgcagatttgaagcgcggcgacattcttgccgtgccggtcaccggagcatatggccgt
actatggccagcaactataaccaggcgttgattccggctgtggtcgccgtgtctgagcag
ggcgcgcatgttatgttgcgccgccagaccatcgatgacctgctggacttggatcaaggc
tga
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