Blastococcus brunescens: U6N30_07715
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Entry
U6N30_07715 CDS
T09910
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bbrg
Blastococcus brunescens
Pathway
bbrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U6N30_07715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrg03019
]
U6N30_07715
03009 Ribosome biogenesis [BR:
bbrg03009
]
U6N30_07715
Enzymes [BR:
bbrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
U6N30_07715
Messenger RNA biogenesis [BR:
bbrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U6N30_07715
Ribosome biogenesis [BR:
bbrg03009
]
Prokaryotic type
rRNA processing factors
U6N30_07715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RD3
Motif
Other DBs
NCBI-ProteinID:
WRL65488
LinkDB
All DBs
Position
1152910..1154853
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AA seq
647 aa
AA seq
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MNWDAAGLSGKQRSIETAMKSGDKVLVQVTKDPIGHKGARLTQQINLPGRFLVFVPGGSM
TGISRKLPDTERQRLKDILKKIVPEDAGVIIRTAAEGASEEELTRDVNRLTAQWDVIQKK
AESTSNAPTLLYGEPDLAIRVIRDVFNEDFKDLVVQGDDAWDTVEAYVAHVSPELTGRLS
RYTGEGDVFHDLRIDEQLMKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLE
QTVTRNNMEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLTECLGRDRTKHQV
AEVTSLGLVQMTRKRVGQGLLEVFSEPCEHCRGRGVLVSTDPVDEKRRGGGGAGGNSGGG
NGGGGGNGGGTGRRDRSGGRDNAKDAGKDAAKDAGRDDAKEHGKDLATEVVPAGSSEETA
AGSADGEAEGSRGGRRNRGRRNRGQSGRSGRPRTPPCSPVPPRTPDPRARHPRARHPRAR
HPRRRRPWRDPRHPRSRCSRSTRRSRRAPRPSTYRPKPQQSRSLPSRWLRGTRLRSGRPS
RRPRSRNRASRRRRRRSRPRVPAVAARRAVRRARPSPDPERGATGPCSGAESAQVRWSGC
TATARAPSGAAGSGDRSPSSTRRSLRSARRNTELAKSDTRSQWCTQW
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgccgcagggctgtcgggcaagcagcggtccatcgagacggcgatgaag
tccggggacaaggtcctggtgcaggtgaccaaggacccgatcggccacaagggcgcccgg
ctgacccagcagatcaacctgcccggccgcttcctggtcttcgtgcccggcggctccatg
accgggatcagccgcaagctgcccgacaccgagcggcagcggctcaaggacatcctcaag
aagatcgtccccgaggacgccggcgtgatcatccggaccgccgcggagggcgcctcggag
gaggagctcacccgcgacgtcaaccggctgaccgcgcagtgggacgtcatccagaagaag
gccgagtcgacctcgaatgcgccgaccctgctctacggcgagccggacctggcgatccgg
gtcatccgcgacgtcttcaacgaggacttcaaggacctcgtcgtccagggcgacgacgcc
tgggacaccgtcgaggcctacgtcgcgcacgtctccccggagctgaccgggcgcctctcg
cgctacaccggcgagggcgacgtgttccacgacctgcgcatcgacgagcagctgatgaag
gcactagaccgcaaggtctggttgccctcgggcggctcgctggtcatcgaccgcaccgag
gccatgacggtcgtcgacgtcaacaccggcaagttcgtcggctccggcggcaacctggag
cagaccgtcacgcgcaacaacatggaggccgcggaggagatcgtccgccagctccggctg
cgcgacatcggcggcatcatcgtcatcgacttcatcgacatggtcctcgagagcaaccgc
gacctcgtgctgcggcggctcaccgagtgcctgggccgcgaccgcaccaagcaccaggtg
gccgaggtgacctcgctgggcttggtccagatgacccgcaagcgggtcgggcaggggctg
ctcgaggtcttctccgagccctgcgagcactgccgcggccgtggtgtcctcgtcagcacc
gatcccgtggacgagaagcgccgcggtgggggtggcgcgggcgggaactccggtggcggc
aacggcggcgggggtggcaacggtggcggcaccggccgccgtgaccgctccggcggccgg
gacaacgccaaggacgcaggcaaggacgcagccaaggacgcgggcagggacgacgccaag
gagcacggcaaggacctcgccacggaggtcgtgccggccgggtcgtcggaggagacggcg
gccggatccgcggacggcgaggccgagggctcccggggcggtcgtcgcaaccggggacga
cggaaccgcggccagtcggggaggagcgggcggccgaggacgccgccgtgctcgccggta
ccgccgaggacgccggatccgagggcgcggcatccgagggcgaggcatccgagggcaagg
catccgaggcggcgtcggccgtggcgggacccgaggcatccgcggtcgaggtgctcccgg
tcgacgaggagatcgcggagggctccccggccgagcacgtaccggccgaagccacagcag
tcgaggtcgctgccgtcgaggtggctccgggggaccaggctccggagcgggcgtccgtcg
aggcgcccccggtcgaggaacagggcgtcccggcgccggcggaggcggagtcgaccacgc
gtccccgccgtcgccgcgcggcgagccgtccggcgggcccgcccgtctcctgacccggag
cggggcgcgacgggaccctgcagcggggctgaatcggctcaggtacgctggtcgggttgc
accgccaccgcgcgggcgccttcgggtgccgccgggtcaggcgaccgcagcccgtccagc
acccggcgatcgctccggtctgcgcgccggaacacagagctagcaaagagcgatacgagg
agtcagtggtgtacgcagtggtga
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