Blastococcus brunescens: U6N30_16700
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Entry
U6N30_16700 CDS
T09910
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbrg
Blastococcus brunescens
Brite
KEGG Orthology (KO) [BR:
bbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrg03032
]
U6N30_16700
03400 DNA repair and recombination proteins [BR:
bbrg03400
]
U6N30_16700
Enzymes [BR:
bbrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U6N30_16700
DNA replication proteins [BR:
bbrg03032
]
Prokaryotic type
DNA Topoisomerases
U6N30_16700
DNA repair and recombination proteins [BR:
bbrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U6N30_16700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WRL61767
LinkDB
All DBs
Position
complement(2504426..2505229)
Genome browser
AA seq
267 aa
AA seq
DB search
MNGPGYRRRKVGRGFAYYDVDGALVRDDRLDRIRGLAIPPAWKDVWICPWPNGHIQATGV
DAAGRRQYRYHDEWRTRRDAEKHERVLEIARELPDVRDAVQAGLRTRGLNRDRVLATAIR
MLDLGAFRVGSEQYEEENGTYGLATLKRSHVSVRGERTFYTYTAKGGIEREVEITDRPTA
TVVRQLLERPADAGEDLLAYQDEDGEWRDVTSAEINAYLKEISGAELTAKDFRTWTATVL
MAAALAEIPRRPAGPPGRRSSAPRTSR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtcccggctaccggcggcgcaaggtcggtcgaggtttcgcctactacgacgtc
gacggcgccctcgtccgcgacgaccggctcgaccggatccgtggcctggccatcccgccg
gcctggaaggacgtctggatctgcccgtggcccaacgggcacatccaggcgaccggcgtc
gacgccgcgggccgacggcagtaccgataccacgacgagtggcgcacccggcgcgacgcg
gagaagcacgagcgggtcctcgagatcgcccgtgagctccccgacgtgcgggacgccgtg
caggccgggctgcgcacccgcggcctgaaccgcgaccgggtgctggccaccgccatccgg
atgctggacctgggggcgttccgggtgggcagcgagcagtacgaggaggagaacggcacg
tacggcctggcgacgctcaaacgcagccacgtgtcggtgcgcggagaacggaccttctac
acctacacggccaagggcggcatcgaacgcgaggtcgagatcaccgaccggccgaccgcc
accgtcgtccggcagctcctggagcggcccgccgacgccggcgaggacctgctggcctac
caggacgaggacggcgagtggcgcgacgtgaccagcgccgagatcaacgcctatctcaag
gagatcagtggcgcggagctcaccgcgaaggacttccgcacctggacggcgaccgtgctc
atggcggccgcgctggcggagatcccccgccggccagcaggaccgcccggaagaaggtca
tcagcgccgcgtacaagcaggtga
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integrated database retrieval system
