Blastococcus brunescens: U6N30_18085
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Entry
U6N30_18085 CDS
T09910
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bbrg
Blastococcus brunescens
Brite
KEGG Orthology (KO) [BR:
bbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrg03016
]
U6N30_18085
Enzymes [BR:
bbrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
U6N30_18085
Transfer RNA biogenesis [BR:
bbrg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
U6N30_18085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
EspB_PE
Motif
Other DBs
NCBI-ProteinID:
WRL61988
LinkDB
All DBs
Position
2712843..2714144
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AA seq
433 aa
AA seq
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MGAGPTDEDRQEGGRQLSTEPAPSAADDAAAPEASPPAVPLLAPRDGLPPVVETSTQLVE
YAEALRAGTGPVAVDAERASGYRYGQKAYLVQMRRNGSGSGLIDPVPLPDLSVIQDAVAD
TEWVLHAANQDLPCLAEIGLVPRRIFDTELAARLAGLPRVGLGAVVESLLGFSLQKGHSA
ADWSTRPLPEEWLVYAALDVEVLVDLRDALAAILDEQGKTEWARQEFEAILAAGPPAPKT
DPWRRTSGVHGLRSRRQLAMLRSLWEARDDMARRRDIAPGRVLPDSAMVAAVQADPANEG
ALLELPVFRGRANRKLVATWFGAMARGKVLPEAELPLHSKSGDGPPPVNRWADRDPAAAN
RLQAARAGLAEISEKHSVPVENILSPDLVRRIMWSPPEPRDAATVADALRAGGARAWQVE
LTLAVLTDAVGKA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgctggcccgaccgacgaggaccggcaagaaggtggacggcaactgagcaccgag
cccgctccctccgctgcggacgacgccgccgctccggaggcgtcgcctcccgcagtgccg
ctcctcgcaccccgcgacggcctgcccccggtcgtcgagacctcgacccagctggtcgag
tacgccgaggcgctgcgcgccggcaccgggccggtcgccgtcgatgccgaacgggcctcc
ggctaccgctacggccagaaggcctacctggtgcagatgcgccgcaacggctcgggcagc
gggctgatcgaccccgttcccctgcccgacctgtcggtgatccaggacgccgtcgccgac
accgagtgggtgctgcacgcggcgaaccaggacctgccgtgcctggccgagatcggcctg
gtcccccggcgcatcttcgacaccgagctggccgcccggctggcggggctgccccgggtc
ggcctcggcgccgtcgtcgagtcgctgctgggcttctcgctgcagaagggccactccgcc
gccgactggagcacccggccgctgcccgaggagtggctggtctacgccgcgctcgacgtg
gaggtcctggtcgacctccgcgacgcgctcgccgcgatcctcgacgagcagggcaagacc
gagtgggcgcgacaggagttcgaagcgatcctcgccgccggtcccccggcgccgaagacc
gatccgtggcggcgcacctccggcgtgcacggcctgcgcagccgccgccagctggcgatg
ctgcgcagcctctgggaggcgcgcgacgacatggcccgacgccgcgacatcgcgcccggc
cgggtgctccccgactcggcgatggtcgccgccgtccaggccgacccggccaacgagggc
gccctgctcgagctgccggtgttccggggacgtgccaaccgcaagctcgtcgccacctgg
ttcggcgcgatggcccgcggcaaggtcctgcccgaggccgagttgcccctgcacagcaag
tccggtgacgggccgccaccggtgaaccgctgggccgaccgcgaccccgcggccgcgaac
cggctgcaggccgcccgcgccgggctggccgagatctcggagaagcactccgtgccggtg
gagaacatcctgtcaccggacctcgtccgccggatcatgtggagtccgccggagccgcgg
gacgccgcgaccgtggccgacgcgctgcgggccggtggcgcccgcgcgtggcaggtggag
ctcaccctcgccgtcctcaccgacgccgtcgggaaggcctga
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