Blastococcus brunescens: U6N30_19085
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Entry
U6N30_19085 CDS
T09910
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bbrg
Blastococcus brunescens
Brite
KEGG Orthology (KO) [BR:
bbrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrg03016
]
U6N30_19085
Enzymes [BR:
bbrg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
U6N30_19085
Transfer RNA biogenesis [BR:
bbrg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
U6N30_19085
Prokaryotic type
tRNA splicing ligases
U6N30_19085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WRL62147
UniProt:
A0ABZ1AVH7
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All DBs
Position
2854619..2855782
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AA seq
387 aa
AA seq
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MEKINGRLLNWASILEDTTREQAERTAAMPFIYPHLALMPDAHLGMGATVGSVIPTDGAI
IPAAVGVDIGCGMIAVRTQFTADDVARRDLSVLHGQISRSIPLSAGGRNTKIRASAEPRI
AELRETPGVGQADAAVAHWPQQLGSLGSGNHFAELSLDEIDRVWLFLHSGSRGVGNKLAQ
KHIRIAQEQCRRRHIQLPDRDLAYLVEGEPEFDAYIEALRWAQRFAYLNREEMMDRCVDQ
LGRFLGTEVERHETVNAHHNYTERETHYGREVWLSRKGAISARAGEPGLIPGSMGTASYV
VVGRGNVPSLMSSPHGAGRNFSRSAARKRFTRKDLDARMTGIAWGHSDAFLDEHPDAYKP
IDQVMADAADLVEVRHTLRQIVNVKGD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatcaacggacgcctgctgaactgggcgtcgatcctggaggacaccacccgc
gagcaggccgagcgcaccgcggcgatgccgttcatctacccgcacctggccctcatgccg
gacgcccacctgggcatgggcgcgaccgtcggctcggtgatccccaccgacggcgcgatc
atcccggccgccgtcggcgtcgacatcggctgcggcatgatcgccgtccgcacccagttc
accgctgacgacgtcgcccgccgcgacctgtccgtgctgcacggccagatctcgcggtcc
atcccgctgtcggccggcggccggaacaccaagatccgggcgagcgccgagccgcggatc
gccgaactgcgcgagacgcccggcgtgggtcaggccgacgccgcggtggcgcactggccg
cagcagctggggtcgctcgggagcgggaaccattttgccgaactgagcctcgacgagatc
gaccgggtctggctgttcctccattccggatcgcggggtgtcggcaacaagctcgcgcag
aagcacatccggatcgcgcaggagcagtgccgtcgccggcacatccagctgcccgaccgc
gacctcgcctacctggtggagggcgagccggagttcgacgcctacatcgaggcactccgc
tgggcgcagcggttcgcctacctcaaccgcgaggagatgatggaccgctgcgtcgaccag
ctcggccgcttcttgggcacggaggtggagcgccacgagacggtcaacgcccaccacaac
tacaccgagcgcgagacgcactacgggcgcgaggtgtggctgtcgcggaagggcgcgatc
tcggcgcgggcaggcgagccgggcctgatccccggctcgatggggacggcgtcctacgtc
gtcgtcggcaggggcaacgtgccctcgctgatgtcctcgccgcacggcgcgggccgcaac
ttctcgcgctcggccgcccggaagcggttcacgcggaaggacctcgacgctcggatgacg
ggcatcgcgtgggggcactcggacgcgttcctcgacgagcaccccgacgcgtacaagccg
atcgaccaggtgatggccgacgccgccgacctggtcgaggtgcggcacacgctgcgtcag
atcgtcaacgtcaagggcgactga
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