Blastococcus brunescens: U6N30_21705
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Entry
U6N30_21705 CDS
T09910
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbrg
Blastococcus brunescens
Pathway
bbrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U6N30_21705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrg03400
]
U6N30_21705
Enzymes [BR:
bbrg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
U6N30_21705
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
U6N30_21705
DNA repair and recombination proteins [BR:
bbrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U6N30_21705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
Ribonucleas_3_3
dsrm
Ribonuclease_3
Motif
Other DBs
NCBI-ProteinID:
WRL62575
LinkDB
All DBs
Position
complement(3233677..3234555)
Genome browser
AA seq
292 aa
AA seq
DB search
MGPHLLLGRGEETTGGREKDSILADAVEALIGAVHLGCGLDSAAAIVHRLFDPMLVEAAT
RGAGLDWKTSLQELGAARGLGAPSYQVVDEGPDHAKTFAASVLLAGTVYGRAAAGPRRPP
NRRPPRRPGGRSRRRSDDVPELPEVEVVRRGLEQWVAGRTVATVEVHHPRAVRRHLEGAD
HFVAALTGRTLTAAHRRGKYLWLPVAEPDGAPSGRSLVAHLGMSGQLLVEKRTQPDETHL
RARFTFTDGGRELRFVDQRTFGGLAVEESGPDGVIPPRLAHIAIDPSMRRST
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggggccccatctgctgctcggccggggcgaggagaccaccggcggccgggagaaggac
tcgatcctcgccgacgccgtcgaggccctcatcggagccgtacacctcggctgcggcctg
gacagcgccgccgccatcgtccaccggctcttcgaccccatgctggtcgaggccgcgacc
cgcggcgccggcctggactggaagaccagcctccaggagctgggcgccgcccgcggactg
ggtgcgcccagctaccaggtggtggacgagggtcccgaccacgccaagaccttcgccgcc
tcggtgctcctcgcgggcaccgtctacggaagggcagcggccggaccaagaaggccgccg
aacaggaggccgccgaggcggcctggcgggcgctcacgacggaggtctgacgacgtgccg
gagcttcccgaggtcgaggtggtgcggcggggcctggagcagtgggtggccgggcgcacg
gtcgccacggtcgaggtgcatcacccgcgggcggtccgccggcacctcgagggcgccgac
cacttcgtcgcggcgctgaccgggcgcacgctcaccgccgcacaccgtcgcggcaagtac
ctgtggctgccggtggccgagccggacggggcgccgtcaggccgctcgctggtcgcccac
ctgggcatgagcgggcaactgctggtggagaagcgcacccagccggacgagacgcacctg
cgcgcccgcttcaccttcaccgacggcggccgcgagctgcgcttcgtggaccagcgcacc
ttcggcgggctggccgtggaggagagcgggccggacggggtcatcccgcctcgcctggca
cacatcgccatcgacccctcgatgaggcgttcgacgtag
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