Bifidobacterium breve JCM 7017: B7017_0764
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Entry
B7017_0764 CDS
T03120
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bbrj
Bifidobacterium breve JCM 7017
Brite
KEGG Orthology (KO) [BR:
bbrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrj03016
]
B7017_0764
Enzymes [BR:
bbrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B7017_0764
Transfer RNA biogenesis [BR:
bbrj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B7017_0764
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHJ17279
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All DBs
Position
944539..945840
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AA seq
433 aa
AA seq
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MSDVHDTEPRLLKEPRGGVPDVTSTIEGYHHVCEALADASGSLAADAERASGFRYGHEDW
LIQCKREGAGIALLDPIALTQSGADWNEFNEAVGDATWILHDSLMDLPGFADLGLQPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LENLMRRDLRAAGKDEWAEEEFTHALSEGLAPRKPHPVPWLRISRITQLSRDPQGLAIAK
SLWQERDKLARQHDIAPSLLLSDSSIIEAATRKPHNAAQFRALRSLNERVRIRTGTEQDK
MFERYAPIQRAVKPKVWKEAIDRAMALRPSQWPSMPAPAPDENGIVNAPRSMRLWQQRHP
DRYDRLQRVRRVITSIAEDTRTPAEMIIKPQILRNLCWVENPAEVDVEEFLIAQGARNWQ
VKLIAPSVSGVIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgtccatgacaccgaaccacggttactgaaagagccgcgcgggggagtgccg
gatgttacctcgacgattgaaggctatcatcacgtctgcgaagcgttggctgatgcttct
ggctccttggccgccgatgccgaacgcgcatctggattccgttatggccacgaggattgg
ctgattcaatgcaaacgagaaggtgcgggcatcgcattgctcgaccccatcgccttgacc
caatctggtgccgactggaacgaattcaatgaggccgtgggcgatgccacttggattttg
catgattccctgatggatttgccgggattcgctgatctgggacttcagccgaaggcgctg
ttcgacacggagatcgccgcgcgtctgctcggtttgcatcgattcggattagccgccgtc
accgaacattatcttggcatcactttggccaaggaacattctgcggctgactggtcctac
cgcccgctgccacgagactggcgcaactatgcggcgcttgacgtggaagtgctgatcgag
ctcgaaaacctgatgcgccgcgatctgagagccgccggcaaggacgagtgggctgaagag
gaatttacccatgcactgtccgaaggactcgcccctcgcaaaccccatccggttccgtgg
ctgcgcatttcccgcatcacccagctgagccgtgatccgcagggattggccatcgccaag
tctctgtggcaggagcgggacaaactggcccggcagcatgacattgcccccagcctgctg
ttgtctgattcctcgattatcgaggctgcgacgcgcaagccgcataatgccgcccagttt
cgggctctgcgctcgctcaatgagcgtgtgcgcattcgcaccggcaccgagcaagacaag
atgtttgaacgttatgccccaatccagcgtgccgtcaaacccaaggtttggaaagaggcc
attgatcgggccatggcgctgcgcccctcccaatggccgagtatgccggcacccgcgccg
gacgagaacggcatagtgaatgcaccgcgttcgatgcgactctggcagcaaaggcacccc
gaccgatatgaccgactgcaaagggtccgtcgcgtgatcacttcgatagccgaagatacg
cgtacaccggccgagatgattatcaagccgcagattctgcgcaacctatgctgggtggag
aatccggccgaagtggacgtcgaggagttcctgatcgcgcagggcgcaagaaactggcag
gtgaaactcattgcaccgtccgtaagtggcgttattatgtag
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