Bifidobacterium breve JCM 7017: B7017_1799
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Entry
B7017_1799 CDS
T03120
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
bbrj
Bifidobacterium breve JCM 7017
Brite
KEGG Orthology (KO) [BR:
bbrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrj03400
]
B7017_1799
DNA repair and recombination proteins [BR:
bbrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B7017_1799
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
DnaB_C
ATPase
ABC_tran
Lon_C
ChlI
AAA_16
Rad51
SLFN-g3_helicase
RsgA_GTPase
AAA_22
EAD2
DUF7125
NACHT
AAA_19
Isochorismatase
NTPase_1
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHJ18030
LinkDB
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Position
1874790..1876289
Genome browser
AA seq
499 aa
AA seq
DB search
MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAA
VPDTARAAAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ
TAGNIARAVAEGQTINAAGRGQSSHRSSGLASTRAHTVLYISGEESQAQVRLRATRINAV
EPNLLLAATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDT
AKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFAGDSETALRMLRAAKNRFGPTDEV
GCFDMSGEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALVTNS
VLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVGAL
ASAATSKPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVHVDGL
KLVEASTLADALHALGVRK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaagtgtgcagtacgtgtgttccgaatgcggatggaacggcccgaagtgg
tatggccgttgccctgaatgtgggcaatggggaacggtcgaggagtttcatgaagcccgt
ccggctgcgggttcacacaccgctgcgcccgggcggacatcacgcacacgatcggcggcc
gtgccggacaccgcgcgtgccgcagccaagccgattaccgaaatcggtacggaaaccgtg
gaacgcttgggcacggggttttccgaattcgaccgtgtgctgggcggcggcgtagtgcca
ggttcggtaacgttgattgccggtgagcccggcatcggcaagtcaacactgctgctgcag
acggccggtaatatcgccagggcagtggctgaaggccaaacaatcaacgctgccgggaga
ggccaatcatcgcatcggtcttccggattagcctcgactcgcgctcacacggtgctctat
atttccggtgaggagtcacaggcacaggtgcgtctacgcgccacccgcattaatgcagtg
gaaccgaatctactgcttgccgccaccaccgatctggctaccgtattgggcttaatagag
cagaacaaaccggcactggccatcgtcgattcggcacagaccattgtttcgcaggaagtc
gatggcatctcgggcggttccacacaggtgcgagaggtggcaagcgccctgatcgacacc
gctaaaactctcgatatccccgtgtttttggtgggtcatgtgaccaaggacggctcgatt
gccgggcctcgtaccctcgagcatttggtcgacgtggtctgccagtttgcgggagacagc
gaaacggccctcagaatgctcagagcagcgaaaaaccgttttggcccgaccgatgaggtg
gggtgcttcgacatgagcggcgaaggcatcgaagaagtcaccgaccccgccggactgttc
ttgtccggagatggcccggaatcagccaatgacgctcccgtggagggcacatgcgtgaca
ttcacgctggacggccatcgcagtctgcctatcgaagtgcaagcattggtcaccaattca
gtgctgcctacgccaaggcgtgccgtcaatggcgtggatcccagccgcattgccatgttg
gtcgccgtgctgtaccggcacagcaaactcaatctgctttccaacgatctgtatatttcc
accattgccggaggtcaggccaaggagcccggttcggatctggccattgttggagcgctg
gcaagcgcggccacatcgaagccgattgcccgctccacctgtgccatcggagaaatatcg
ttgaccgggcaggttcgtcccgtaccgcgcatggaatatcgtttgcgcgaggcagcacgc
ctcgggttcactacggcggtcattccacccttgcgcaaaccggtgcacgttgatgggctg
aaactcgtcgaggcgagcacgcttgccgatgcgcttcatgcattaggcgtacggaagtaa
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