Bifidobacterium breve NCFB 2258: B2258_0006
Help
Entry
B2258_0006 CDS
T03122
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_0006
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0006
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B2258_0006
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Topoisomerases
B2258_0006
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B2258_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
Motif
Other DBs
NCBI-ProteinID:
AHJ20268
LinkDB
All DBs
Position
7264..9954
Genome browser
AA seq
896 aa
AA seq
DB search
MADETNNTGDEQFTPDGSMEPLSPQEADTTDYGLMESGERIQRKDLQQEMRESYLAYALS
VIVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAIYD
TLVRMAQSWSMRNLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFVP
NYDGKTQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNMREVAEGVHWALEHPDASREE
LLENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEINGRMCLVVTELP
YQVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLDVIARRTAYLKREAEERDHILQGYL
KALDMLDEVIALIRASEDTDTARTGLMELLDIDQVQADAILAMQLRTLTRMNRDKIVAEH
EELQRKIADYIDILAKPERQRKIIGDELDEIVGKYGDERRTKILPFSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKADEYRAQHRGGKGIKGTKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFAPDESIQAVLSIPNYEVAKYLVLATRSGKVKKT
PLAEYDSPRQGGLIAVRLMADENGENADELIGAALCNAEDDIILVSKLGMSLKFQANDEQ
LRPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLFVVTNEGFAKRTAISEYRLQGRNG
LGIKAVQLVEGRGSLVGALVVSEDDQVMAIMKSGKVIRSNVDEVKRTGRNTQGVTFAKPD
KGDEILSIARNEEKDDPEEEVADNGTAEAGQSPAEPVNESNETAQSGENVNNVDEA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaacaaacaacaccggtgacgaacagttcaccccggatggctcgatggag
ccgttgagcccgcaggaagcggacaccactgactacggtctgatggaaagcggcgaacgc
atccagcgcaaggatttgcagcaggagatgcgcgaatcctacctagcctacgccctttct
gtcatcgtggaacgtgctctgccggacgtgcgcgacggcatgaaacccgtgcaccgccgt
gtgatctacgcgatgtacgacggcggctatcgccccgaccgcggctacaacaagtgctcc
cgcgtggtcggcgacgtcatgggtaaataccatccgcacggcgactccgccatctatgac
actttggtgcgcatggcccagtcctggtcgatgcgtaacctgctcgtcgacggtcagggt
aacttcggttcccctggcgacgaccctgccgccgccatgcgttacaccgaatgccgtatg
gccccgctggccatggagatggtgcgcgacatcgacaaggacaccgtcgacttcgtgccc
aactacgacggcaaaacccaggaaccgactgtattgccggcccgcttcccgaacctgctg
gtcaacggctccgccggcatcgccgtgggtatggccaccaatattccgccgcacaacatg
cgcgaggtggccgaaggcgtgcactgggcgcttgagcatccggacgccagccgcgaagag
ctgctggaaaacctgattcgcatcatcaagggaccggacttccccaccggcgccactatc
ctcggtcacaagggcatcgaacaggcctaccgcaccggccgtggcctcatcactatgcgt
gccgtggtcaacactgaggagatcaacggccgcatgtgcctggtggtcaccgagctgccg
taccaggtcaacccggatcgtctggtcgtctccattcgtgaggccgtgcgcgacggcaag
attcagggcatcgccgacatgcgcgacgaaacctccgggcgtacaggccagcgcctcgta
ttggtgctgaagcgtgacgccgtgccgaaggtggtgctgaacaacctgtacaagcactcc
cagctgcagcagaccttcggtgccaacatgctggccctggtcgacggcgtgccgcgcacg
ctgagcctggacgccttcatccgccattgggtgaaccaccagctcgacgtgatcgcccgc
cgtaccgcatacctgaagcgtgaagccgaggaacgcgaccacatcctgcagggctacctc
aaggctctcgacatgctggacgaggtcatcgccctgatccgagcctccgaagataccgat
accgcccgtaccggtttgatggagcttctggacatcgatcaggtgcaagccgatgccatc
ctagccatgcagctgcgcacgctgacccgcatgaaccgcgacaagatcgtggccgaacac
gaggaattgcagcgcaagatcgccgactacatcgacattcttgccaagccggaacgccaa
cgcaagatcatcggtgacgaactcgacgagattgtgggcaagtacggtgacgaacgccgt
accaagatcctgccgttctccggtgagatgaacgtcgaagacctgatcgccgaagagaac
gtggtggtcaccgtgacccactccggcttcatcaagcgcaccaaggccgacgaataccgc
gcccagcaccgtggcggcaagggcatcaagggcaccaagctgcgcgaggacgacgtggtg
gatcacttcttcctgacctccacgcacaactggctgctgttcttcacgaacaagggtcgc
gtctaccgcatcaaggcctatgagctgcccgagggttctcgtgattccaagggccagcac
gtggctaacctgctgcaattcgcgcccgacgagtccatccaggccgtgctgtccatcccg
aactacgaggtggccaagtatctggtgctcgccacccgttccggcaaggtcaagaagacc
ccgctggccgagtacgactccccgcgtcagggcggcctcatcgccgtgcgcctgatggcc
gacgagaacggcgagaatgccgacgagctgatcggtgccgcgctgtgcaacgccgaggat
gacatcatcttggtctccaagctcggcatgagcctgaagttccaggccaacgatgagcag
ctgcgcccgatgggtcgtcagactgccggtgtgcagggcatgaaattccgcgagggcgac
gagctactggccatggatgtggtatggggcgactccgacaaggatctgttcgtagtgacc
aacgaaggcttcgccaagcgtacggccatcagcgaataccgcctgcagggccgtaacggc
ctgggcatcaaggccgtgcagctggtcgaaggccgcggctctctggtcggcgcgctcgtg
gtgtccgaagatgatcaggtcatggccatcatgaagtccggcaaggtgattcgttccaac
gtggacgaggtcaagcgcaccgggcgcaacacccagggtgttaccttcgccaagcctgat
aagggcgacgaaatcctttccatcgcacgcaacgaagaaaaggatgaccccgaagaggag
gtcgccgacaacggcactgccgaagcaggccagtcccccgccgaaccggtgaacgagtcc
aacgagaccgcacaatccggtgagaatgtgaacaacgtggacgaggcgtga
DBGET
integrated database retrieval system
