Bifidobacterium breve NCFB 2258: B2258_0129
Help
Entry
B2258_0129 CDS
T03122
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03030
DNA replication
bbrn03430
Mismatch repair
bbrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2258_0129
03430 Mismatch repair
B2258_0129
03440 Homologous recombination
B2258_0129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_0129
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0129
Enzymes [BR:
bbrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2258_0129
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B2258_0129
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B2258_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
AHJ20380
LinkDB
All DBs
Position
172551..175205
Genome browser
AA seq
884 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGRLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICEKESIKPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAIDAVIDHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDRAESVLSDTAEAEDMDDLHRQAKALGLSALTAIADIINTTLGAMTGAISPRMRLELLA
ARLLAGSENGFVAPAAAPALGAPAPATGAVASAAPATGGAAGGFAGASRGGFVGASHGGF
AGAARNQAQTQTAPAAAAPAAPASPATNAAAPSSDSRSTDEKWNAAVAALPQAIREYVTR
DKVPTVAFGPNRKGLPCLSMTFDKPLSQHAFALAVDNSGKKAAIVVMDAVRQEFGADAVI
APAAVAANGERVESVKRLSPEQLAKVKQQIAMAKAGLAASSLGAGLGMHSGSEPKAQKPA
AEGNAEDADGSHRASGVTPGGASNKPDLDDDDPWAKPAALSEAVGEPSASAGEPSVDGFA
PSNPDPASAQAPEKHHKKHVAVPDMSDDVDPWATPAAPVAHAQDATANTQAGQAEQSAAS
ASSNVGAPAADPAVPTASADPWNQPVPPPAEPKGDPWNQPAASAPQAAPDPWNQPAPPQS
EPDPWNQPQGQAQRQTPSQSQGMPQSQNSGAADPWNQPVPPSPQPQVAAEDDEYSMSDQS
LGDATAMKMDDLKKLFEVKKVEEFAADDPKNPKNIQPAKKHTDD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtcgctatcgtccggacacctttgaaggtgtgatcggccag
gaccaggtcacggttcctttgatgcgagcccttgacgagggcaggctcacgcatgcctat
ttgttctccggcccgcgaggctgcggcaagaccagttccgcgcgtatcctggcccgttgc
gtcaactgcgccaagggcccaacctcgcatccgtgcggcgagtgtgaaagctgcaaggat
ctggccaccggaggcccgggatccatcgatgtggtcgaaatcgatgccgcctcacacaac
ggtgtggacgatgcccgcgaattgcgcgaacgcgccgggttcgcccccgcccgcgaccgc
tacaagattttcatcctcgacgaggcccacatggtcacgcagcagggcttcaacgcgctg
ctcaagatcgttgaggaaccgcctgagcatgtgatgttcatcttcgccaccaccgaaccg
gacaaggtgattggcaccatccgctcgcgtacccatcattacccgttccgtctggtgccg
caggaggtcatgggcccctatctggaaacgatctgcgagaaagagagcatcaagcctgag
cccggcgtgctgaaactcgcgatgcgtgccggcggcggctccatgcgagacaccctgtcc
gtgttggaccagctcatggtcggttccgtcgagggcgtcatcacccatgatgccgccgtg
gctctgcttggtttcactcctgaagcgttgatcggtgaggccatcgatgcggtcatcgat
cataacggcgaggccctgtacggcgtgattcagaaggtcgtggtcggcgggttcgaccca
cgacgattcgtggaggatctactggcccgcgtgcgtgacctgctggtgctgactttggcg
ggcgaccgcgcggaatccgtgctgtcagacacggccgaggccgaggatatggacgacctg
caccgccaggccaaggcccttggactgagcgcgctcaccgccattgcggatatcatcaac
accacgctgggtgccatgaccggtgccatctccccgcgtatgcgactcgaattgctggcg
gcccgactgctggccggcagcgaaaacgggttcgttgcacccgctgccgctcccgcattg
ggagctcccgcgccagccacaggagccgtagcctctgccgctcccgctacgggaggtgca
gcaggtggctttgccggcgcatctcgcggcggtttcgtcggggcctcacacggtggattc
gccggcgctgcacgaaatcaagcacagacgcagaccgcgcccgcagccgccgcccctgct
gcgcctgcatctcctgctacgaatgctgcggctccaagctccgactcccgatccactgat
gaaaagtggaatgcagccgttgccgcattgccgcaggccatccgcgaatacgtcaccaga
gacaaggtgccgacggtggcattcggccccaaccgtaagggattgccctgcctgtccatg
accttcgacaagccgctcagccagcatgcgtttgcgctcgcggtggataacagcggcaaa
aaggccgcaatcgtggtgatggatgccgtacgccaggaattcggtgccgatgcggttatc
gctcctgcggccgttgcggccaacggtgagcgagtggaatccgtcaagcgcctgagcccc
gaacagttggccaaggtcaagcagcagattgcgatggccaaggcgggtctggccgcttcg
agtctgggagctggcctgggcatgcattccggcagtgagccaaaagctcagaagccggct
gctgaggggaacgccgaagatgcggatggcagccaccgagcctctggcgtaacgccggga
ggcgcttcgaacaagcccgatttggatgatgacgatccatgggccaaacctgccgcattg
tctgaggctgtgggcgagccatctgcgtctgccggtgagccgtctgttgatggttttgct
ccgagcaatccagaccctgcatctgcacaggcgcctgaaaagcaccacaagaagcatgtc
gccgtgccggacatgagcgatgacgtggacccatgggcaacgccggcagcgcctgtcgca
cacgcacaagatgcgaccgccaatacccaggccggccaagctgagcaatccgccgcgtct
gcttcctcgaacgtgggtgccccggctgcggatcctgctgtcccaacggcatccgctgac
ccgtggaaccagccggtgcctccgcctgccgaaccgaagggtgacccgtggaaccagcct
gctgcgtctgcgccgcaagctgcgccggatccatggaatcaaccagctcctccgcaatcg
gaaccggatccgtggaatcaaccgcagggtcaggctcagcggcagaccccatcgcagagt
cagggtatgccgcaaagccagaactcgggcgctgctgacccgtggaaccagccagtgcca
ccgagtcctcagccgcaggttgcggccgaggacgatgagtattcgatgagcgaccagtcg
cttggcgatgccacggccatgaagatggatgatctcaagaagctgttcgaggtcaagaag
gtcgaggagtttgcggccgatgacccaaagaacccgaagaacatccagcccgccaagaag
catacggatgactga
DBGET
integrated database retrieval system
