Bifidobacterium breve NCFB 2258: B2258_0158
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Entry
B2258_0158 CDS
T03122
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03030
DNA replication
bbrn03430
Mismatch repair
bbrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2258_0158
03430 Mismatch repair
B2258_0158
03440 Homologous recombination
B2258_0158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_0158
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0158
Enzymes [BR:
bbrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2258_0158
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B2258_0158
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B2258_0158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
NolB
AAA_22
DNApol3-delta_C
KTI12
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AHJ20408
LinkDB
All DBs
Position
212435..213586
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDSLVGQQPVIDMLSRIAQGDPSQIAQSWLICGPPGSGRSNMARAFAAALESPDHGM
SDEPTRVTQQVLVGTHPDVTVLATNKVTIGIDQVREIITTSEQMPATAPWRIIVIEDVDR
MLERTTNVLLKEIEEPAEHCIWLLCAPSAQDVLPTIRSRTRIVNLAVPSASAVAGFLTAT
TGVEPKVAQRAARLAEGHIGIAKLYATDEQVMTDRDELVVGVLNLARASDAVLLAGNLID
NAKAQAEVDASRTAADQEAEFRRINGLEPGERIPPKLRGAFNQIAKKDDLKRLTTRRTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSAITELSVRLDRAGAVARLDEVAHA
RKRLAGNGNPLLVFESLFCALIP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggattcgttggtaggccagcagccggtaatcgacatgctcagccgcatc
gcgcagggggacccgagccagatcgcccagtcgtggctgatttgcggccctcccggctcc
gggcgttccaacatggcccgtgcgttcgcggcggcgctggaaagccctgaccatggcatg
agcgatgagcctacgcgcgtcacgcagcaggtactcgtcggcacccacccggatgtcaca
gtgctggccaccaacaaagtgaccatcggcatcgaccaggtgcgcgagatcatcaccacc
tccgagcaaatgccagccacagcaccatggcgcatcatcgtcattgaggatgtggaccgc
atgctggagcgcaccaccaacgtgctgctgaaggagatcgaagagccggccgaacactgc
atctggctgctatgcgcgccgagcgcccaggacgtgctgcccaccatccgctcgcgcacg
cgcattgtgaatctcgccgtgccctccgcctcggcagtggccggattcctgactgccacc
acgggcgtcgagccgaaagtcgcccagcgggcggcccgtctggccgagggacacatcggc
atcgccaagttgtacgccactgacgagcaggtgatgacggatcgcgacgaattggtggtg
ggcgtactgaacctcgctcgcgcctcggacgcggtgctgctggccggcaacctcatcgac
aatgccaaggcccaggccgaggtggacgcaagccgcaccgcagccgatcaagaggcggaa
ttccgccgtatcaatggccttgagccgggggagaggattccgccgaagctgcgtggcgcg
ttcaatcagatcgccaagaaggacgatctcaagcggctgaccacgcgacgcacgcgcgat
gtactcgaccgtgcgctcaactccatcgcctccatttaccgtgatgtggcggtcctgcag
aacaatgcggaggattcggtcgggcttatcaacctggagaatcggtcggccatcaccgag
ctgtccgtgcggctggaccgcgccggcgcggtggcccgactggacgaagtggctcacgcc
cgcaagcgacttgccggtaatggcaacccgctgctggtgtttgaatcgctcttttgcgcg
ttgattccgtga
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