Bifidobacterium breve NCFB 2258: B2258_0264
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Entry
B2258_0264 CDS
T03122
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2258_0264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrn03021
]
B2258_0264
03019 Messenger RNA biogenesis [BR:
bbrn03019
]
B2258_0264
Transcription machinery [BR:
bbrn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B2258_0264
Messenger RNA biogenesis [BR:
bbrn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B2258_0264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
PIP5K
NACHT
SAP
Motif
Other DBs
NCBI-ProteinID:
AHJ20508
LinkDB
All DBs
Position
341693..343642
Genome browser
AA seq
649 aa
AA seq
DB search
MKLPELKELAKQMGLRGTSTMRKPELLATLQAARSGGEPPAGVTVRTPKADKAVTKAAKA
EPVVEETVALAEPQLDLSALAEEPKAAEPRRVRRKAADEATEEPRDARHRRDDERTGRKP
RKQADEAGDLLASLDLGETTAPERRRNRRDDTEAPLIRRVHDEDQPRRRRRPADSSDETV
RDLDDILATLPTQKHDEPSDDGEQSEDREFSRRSRNRDRDRDNRNDRNDRRNRRMRGRDR
GENAGEDDRRFDDRENRNDRREEPQEDLVPVAGIVDVLDSYAFVRTSGYLPGPNDVYVSM
GQVKKYGLRKGDAVHGSIRAPRENDRRNQRQKFVPLQSIDSINGQSVEDALNRPQFSKLT
PLYPQERLKQETAPNKLTGRIMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANAIAANNP
EVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTTVAELAIERAKRLVELGQDV
VVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSAL
VETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAIDINASGTRREELITDPQELPII
YRLRRLLGGMEPEQAYQTLVPRLKKTATNRDFLAAIVQQANTGNAVNGN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcctgagctcaaggagctcgccaagcaaatgggtctgcgaggcacgtctacc
atgcgcaagcccgaactgctcgccaccttgcaggccgcccgcagtggcggtgagccgccg
gctggcgtcactgtgcgcactcccaaggccgacaaggccgtcaccaaggcagccaaggct
gagccggtcgtcgaagagaccgttgctctggcggaaccgcagcttgatctatccgcactt
gccgaagagcccaaggccgcggagccccgtcgtgtgcgccgtaaggcagccgatgaggcc
actgaagaaccgcgcgatgcccgtcatcgccgcgatgatgaacgaaccggccgcaagccg
cgcaagcaggccgatgaggccggcgatctgctcgcctccctcgatttgggcgagacaacc
gctcccgagcgccgccgcaaccgtcgtgacgacaccgaagctccgctcattcgccgtgtg
catgatgaggatcagccgcgtcgccgtcgccgtcctgcggacagcagcgacgagaccgtg
cgcgatttggatgacattctggccacgctgcccacgcagaagcacgacgaaccttctgac
gatggtgaacagagcgaagaccgcgagttcagccgtcgcagccgtaaccgtgaccgagat
cgcgacaaccgcaatgatcgcaatgaccgccgcaaccgccgtatgcgtggtcgtgaccgt
ggcgaaaacgccggcgaggacgatcgtcgtttcgatgatcgcgagaaccgcaatgaccgc
cgcgaggagccgcaggaagacctggtaccggtggccggtatcgtcgatgtgctcgattcc
tatgcgttcgtgcgtacgtccggctatctgcctggcccgaacgacgtgtacgtctccatg
ggccaggtcaagaagtatggcctgcgcaagggcgatgccgtgcacggttccattcgagcc
ccgcgcgagaacgatcgccgcaaccagcgtcagaagttcgtgccgctgcagtccattgac
tcgattaacggccagagcgtcgaggacgcactgaaccgtccgcagttctccaaactcacc
ccgctctacccgcaggagcgcctcaagcaggagaccgcgccgaacaagctcactggccgc
atcatggatatcgtttccccgatcggcaagggccagcgtggtctgatcgtctccccgcct
aaggccggtaaaaccatcaccctgcagaacatcgccaatgccattgccgccaacaacccc
gaggttcacctgatggtggtgctcgtggacgagcgacctgaagaggtcaccgatatggag
cgcacggttcagggtgaggtcatctcctccactttcgatcgtcctgcttccgaccacacc
accgttgctgagctggccatcgagcgcgccaagcgtcttgtggagctcggccaggatgtc
gtagtgctgctcgattccatgacccgtctggcccgtgcctacaacatcgcggctccggct
tccggtcgtatcctgtccggtggtgtggatgcccaggcgctctacccgccgaagaagttc
tttggtgcggcccgcaacatcgaaaacggcggctccctgaccatcatctcctcggcgctg
gtggaaaccggctccaagatggacgaggtgattttcgaggagttcaagggtaccggcaac
atggagcttcgcctctcccgagagctggcggacaagcgcttgttcccggccatcgacatc
aacgcctccggcacccgccgcgaagaactcatcaccgacccgcaggagctgccgattatc
tatcgtctgcgccgactgctgggtggcatggagcctgagcaggcctaccagaccctggtg
ccgcgtctcaagaagaccgccacgaaccgcgacttcctagccgctatcgtgcagcaggcc
aacaccggcaacgcggtcaacggcaactga
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