Bifidobacterium breve NCFB 2258: B2258_0303
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Entry
B2258_0303 CDS
T03122
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn00470
D-Amino acid metabolism
bbrn00550
Peptidoglycan biosynthesis
bbrn01100
Metabolic pathways
bbrn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B2258_0303
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B2258_0303
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
B2258_0303
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbrn01011
]
B2258_0303
Enzymes [BR:
bbrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
B2258_0303
Peptidoglycan biosynthesis and degradation proteins [BR:
bbrn01011
]
Precursor biosynthesis
Amino acid ligase
B2258_0303
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AHJ20546
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Position
385937..387124
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AA seq
395 aa
AA seq
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MAKKRIVVLYGGRADEHSISCISTAGVLAAMDTERFEPIPVGITKDGKWIIDGEDPRGWN
LDGDELPTVKITLKSRPVILDPSRGKDGFFAGEPDHLSNADSGFGTSFVSLSDPEIHHVL
TSLGHVDAVLPVLHGPYGEDGTVQGLLEMMGVPYVGCGVFASAACMDKHYTKVVLNAAGI
PTAPGIMVDARAFTAADVVAQIEVAGLAYPLFVKPSRAGSSFGVTKVDKAEDLETQQDRV
AAAIATAGEHDWKVLIEQGIDGREIECAVLCPKAGDEPEASWPGEIVLDHQNDDQFYDFD
SKYMDASASHVEVPANLPVSVLEDVRDVARRAFKAVDGAGLSRVDTFVTPDGTVMVNEIN
TMPGFTPISMYPKAWDATGVGYTELITRLIEGVLK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaacgtattgtggtgctctatggtgggcgtgcggatgaacattcgatttcc
tgcatctccacggccggcgtgctggcggctatggataccgaacgtttcgagccgattccg
gtgggcatcaccaaggacggcaagtggattatcgacggtgaggatccgcgcggctggaat
ctggacggcgacgagctgccgaccgtgaagatcacgctgaaatcccgtccggtgattctc
gacccctcgcgaggcaaggacggtttctttgccggtgagccggatcatctcagcaatgcc
gactccggttttggcaccagctttgtgagcttgtccgatcctgagatacatcacgtgctg
acctcgctggggcatgtcgatgcggtgctgcctgtgctgcatggcccttacggcgaggac
ggcacggtgcagggtcttcttgagatgatgggtgtgccgtatgtgggctgtggcgtgttc
gcctctgccgcctgcatggataagcactacaccaaagtggtgctcaatgctgccggtatt
ccgacagctcccggcattatggtggatgcgcgcgcgttcaccgcagccgatgtggtcgcc
cagatcgaggtcgccggattggcttatccgctgttcgtcaagccttcccgtgctggatcc
agctttggcgtcaccaaggtggataaagccgaggatctggaaacccagcaggaccgtgtg
gccgctgccatcgccacggccggtgagcatgactggaaggtgctcatcgagcagggcatc
gacggccgcgagatcgaatgcgccgtgctgtgcccgaaggcgggcgatgagcccgaggcc
agctggcccggcgaaatcgtgcttgaccaccagaatgacgaccagttctatgatttcgat
tccaagtacatggatgcttccgccagccatgtggaagtgccggccaacctgcccgtcagc
gtgcttgaggatgtacgcgacgtggctcgccgtgcgttcaaggccgtagatggagcgggt
ctgagccgcgtggataccttcgtgactccggacggcaccgtgatggtcaacgagatcaac
accatgcctggcttcacgccgatttccatgtatcccaaggcgtgggacgccacgggtgtg
ggatacaccgaactcatcacccgtctgatcgaaggcgtgttgaagtaa
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