Bifidobacterium breve NCFB 2258: B2258_0304
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Entry
B2258_0304 CDS
T03122
Name
(GenBank) Solute binding protein of ABC transporter system
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B2258_0304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbrn02000
]
B2258_0304
Transporters [BR:
bbrn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
B2258_0304
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_11
DUF4120
Toxin-deaminase
Motif
Other DBs
NCBI-ProteinID:
AHJ20547
LinkDB
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Position
387391..388557
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AA seq
388 aa
AA seq
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MNNLSKIAAGSLAAVLAFSMAACGSSSASSDGAGESAGKAVTVNGKSAKATSLADFGTME
DLEKAAKEEGALNVIALPHDWSNYGEVIEGFKKKYPEIKVTELNPNASSKEELDAAKTNK
GTDAAPDVFDVGQAIAATSTDSFAPYKVQAWDKIPDTAKDADGAYYADYTGIMSVGWNAD
KYGEINSLDDLLDSKFAGTVSLNGKPAEAGAAFNGYLMVNQLAGGDINNLQPGLDFFKKL
QEAGNLTTVDVTNGTIDSGQTGVVFDWTYNQASYKKELKDKGVNWKYKTFPKAQVVSYYN
QAINKDAPHPAAARLWEEYLYTADAQNLWFKGGANPVLLDSMKEDGTVDQDTLKDAITIE
GDPVSYTNDDSTRITEWLQNNWDKTIGN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctgagtaagatcgcggccggctcccttgccgccgtgcttgcgttctccatg
gccgcctgcggctccagcagcgcctcctccgatggcgccggcgaaagtgccggcaaggcc
gtcaccgtgaacgggaagtccgccaaggccacttccctcgccgacttcggtactatggaa
gacctcgaaaaggccgccaaggaagagggtgcgctgaacgtcatcgcgctgccgcacgac
tggtccaactacggcgaggtcatcgagggctttaagaagaagtacccggagatcaaggtc
accgagctcaacccgaacgcttcctccaaggaagagcttgacgccgccaagaccaacaag
ggcaccgacgccgcccccgacgtgttcgatgtcggccaggccatcgccgccacttccacc
gatagcttcgctccgtacaaggtgcaggcctgggacaagattccggacaccgccaaggat
gccgacggcgcctactacgccgactacaccggcatcatgtccgtgggctggaatgccgat
aagtacggtgagatcaactctctggacgatttgctcgattccaagttcgccggcacggtg
tccttgaacggcaagcccgccgaagccggtgccgccttcaacggctacctgatggtcaac
cagctcgcaggcggcgacatcaataacctgcagcctggtcttgacttcttcaagaagctg
caggaagccggcaacctgaccaccgtggacgtgaccaacggcaccatcgactccggccag
accggtgtggtgttcgattggacctacaaccaggcttcttacaagaaggagctcaaggat
aagggcgtgaactggaagtacaagaccttcccgaaggcccaggtcgtgagctactacaac
caggccatcaacaaggacgcgccgcacccggccgccgcccgcctgtgggaggagtacctg
tacaccgccgatgcccagaacctgtggttcaagggcggcgccaacccggtgctgctcgac
tccatgaaggaagacggcaccgttgatcaggacaccctgaaggacgccatcaccatcgaa
ggcgacccggtctcctacaccaacgatgactccacccgcatcaccgagtggctccagaac
aactgggacaagacgatcggcaactga
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