Bifidobacterium breve NCFB 2258: B2258_0603
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Entry
B2258_0603 CDS
T03122
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03030
DNA replication
bbrn03430
Mismatch repair
bbrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2258_0603
03430 Mismatch repair
B2258_0603
03440 Homologous recombination
B2258_0603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_0603
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0603
Enzymes [BR:
bbrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2258_0603
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B2258_0603
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B2258_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHJ20817
LinkDB
All DBs
Position
complement(751375..752082)
Genome browser
AA seq
235 aa
AA seq
DB search
MTVPGITVFGQQSHPDWTAGTPIAEDATGFPTDYVALDLETTGFYPNRCAITEIGAVRVR
GGRVVDQFQQLINPLCPIPRQITALTGITDAMVADHDPIDGVLPQFISWLADSNAAAETE
PIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPKQSHHRLADLIVRFGIAD
NEEHRALSDAIQTQQCFEWMRHYVSEHHESSTIRWKQAPAKNSTEILHQQLVVQR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttcccggcattaccgtttttggccagcagtcccatcccgactggaccgccggc
accccgattgccgaagacgccaccggattccccaccgattatgtggcgcttgatttggag
accaccgggttttatccgaaccgttgcgccatcaccgaaataggtgccgtacgcgtgcgc
ggcggccgtgtcgttgaccagttccagcaactcatcaacccgctatgcccgattcctcgt
caaatcaccgcgttgaccggcattaccgacgcgatggtcgccgaccatgatcccattgac
ggggtgctcccccaattcatttcctggctcgccgattccaacgccgcggctgagaccgag
cccatcgtcggtcataatgtcagcttcgatctgcgattcctggactataacacccgccat
attgcgggatgcggattcgcctgcgccgactatgacaccatgcaaatcagccgtgccctg
ttccccaagcagagccatcaccggctcgccgacctgattgtacgattcggcattgccgat
aacgaggaacaccgcgcattaagcgatgccatccaaacccagcagtgcttcgaatggatg
cggcattatgtcagcgagcaccatgaatccagcacgatccgatggaagcaggcaccagcc
aagaacagcaccgaaattctgcaccagcagttggtggtacagcggtaa
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