Bifidobacterium breve NCFB 2258: B2258_1013
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Entry
B2258_1013 CDS
T03122
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B2258_1013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_1013
Enzymes [BR:
bbrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
B2258_1013
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B2258_1013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHJ21213
LinkDB
All DBs
Position
complement(1216349..1217203)
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AA seq
284 aa
AA seq
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MTGLLIGSHLSTAGGWNELLKRSHEEGGTAFAFFPRSPYGKRSKALDLAGAAVFGAQLRA
EGYGPLVVHAPYVYNLAGKDEAKRAFAIEALAEDIKLLTAIRETGQEVYINIHPGAHVGQ
GAETGCRLISEGLNQVFERTTGVMVLLETMAGKGTECGRNFEELATIMNGVENKANVGVT
FDTCHVLDAGYDLVNDYDGVMRQLDEVIGLAKVKAIHVNDSQFGLDSHKDRHANIGEGQL
GIPFFTRLVNDPIMAKLPMILETKEQTPATHRDEIELLRGLVQK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtttgcttatcggatcgcatttgtcgacggctggcggctggaacgagctgctg
aaacgctcccatgaggagggcggcaccgcgttcgcgttctttccgcgatctccgtatggc
aaacgttccaaggcgctcgacctggccggcgcggcggtgttcggcgcacagctcagggcc
gaaggctatgggccgttggtcgtccatgcgccgtacgtctacaatctggccggcaaggat
gaggccaagcgcgcatttgccatcgaggcgctggccgaggatatcaagctgctgaccgcc
atccgcgagaccggccaggaggtgtatatcaacattcatcccggcgcgcatgtgggccaa
ggcgccgagaccggctgccggctgattagcgagggactgaatcaggtgttcgaacgtacg
accggcgtcatggtgctgctggagaccatggccggcaaaggcacggaatgcgggcgcaac
ttcgaggagctcgccacgatcatgaacggcgtggagaacaaggcgaacgtcggcgtcaca
ttcgacacctgccatgtgctggatgccggatacgacttggtgaacgactacgacggtgtg
atgcgccagttggatgaggtgatcggcttggccaaggtcaaggcgattcacgtgaacgat
tcgcagttcggcctcgactcgcataaggatcgtcacgccaatatcggcgagggccagctc
ggcatcccgtttttcacgcgactggtcaacgacccgatcatggccaagctcccgatgatc
ctcgaaaccaaggagcagacgcccgccacgcatcgcgacgagatcgagttgttgcgcgga
ttggtgcaaaagtag
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