Bifidobacterium breve NCFB 2258: B2258_1143
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Entry
B2258_1143 CDS
T03122
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_1143
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_1143
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B2258_1143
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Topoisomerases
B2258_1143
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B2258_1143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHJ21338
LinkDB
All DBs
Position
complement(1354041..1356392)
Genome browser
AA seq
783 aa
AA seq
DB search
MPKEEYGAKDLSVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGFCNNIV
VTLHTDGSVEVADNGRGIPVDKEPKTGLSGVEVVLTKLHAGAKFGNSSYNAVGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYADADPVNPSPDSPFKRTRKNKPTELEI
IGKVSPKTTGTRIRYWYDPEIFNKTAEFSYEQLIDRVRQTSFLVPGLKITIVDENVPKTN
GADTVGTEPNEDVAVVAESLNTNETANATESFSGEDSPLDGFAELSDDASVDGDTEAPDE
EDFSLSSATEVVDGAFGEQPAHPRTVEFLHTGGVKDFVDFLSKGEPISDIWRIQGEGTYK
EETQAVGEGGELHAQEIERTCGVDIALRWVNGYDTTIMSFVNIVETPGGGMHVDGFMNAI
TKQIRKAVEDNARKLKVNLKDSAMKVERDDIQAGLVAVVTARVAEPQFQGQTKDVLGTAQ
VKPIVTRLTDKQFGEMITGSKRGYKEQSARVLEKIVGEMHARIQSRKAKEVTRRKNALES
ASMPAKLSDCQPGNDDVAELFIVEGDSALGTAKAARNAGFQALLPIRGKILNVQKASITQ
MLSNKECAAIIQVVGAGSGQSFDIEQSRYHKIIMMTDADVDGAHIRILLLTLFYRYMRPL
IEHGYVYAAVPPLHRIALTGSHKGEYIYTYSDDELAGKLADLDKKRIGYNDDIQRYKGLG
EMDADQLADTTMDPRTRMLRRIRMEDAAQASEIFNLLMGDEVPPRKQFIVDNADDFDRSK
IDT
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaagaatacggcgctaaggatttatccgtccttgagggtctggacgcggta
cgcaagcgtccgggtatgtacatcggtaccacggactcgcagggtcttatgcactgcctg
tgggagatcatcgacaactccgtcgatgaggcgttggccggtttttgcaacaacattgtc
gttactctgcacactgatggatcggtggaagtcgcagacaacggccgaggcattccggtc
gataaggaaccgaaaaccgggctatccggcgtggaagttgtcctgaccaagctgcacgcg
ggcgccaagttcggcaattcgtcctataacgcggtcggtggcctgcacggtgtgggctct
tctgtggtcaacgcattgagttcccgtcttgatgtggaagtcgatcgtgacggcaaaacc
catcacatggccttccatcaagggcatcccggcgtatacgcagacgctgatccagtcaac
ccatctccggactcgccgttcaaacgtacccgtaagaataagcccaccgagctggaaatc
atcggcaaggtttcgcccaagaccaccggaacccgcattcgttactggtacgatccggaa
atattcaataaaactgctgaattctcatatgagcagctcatcgaccgtgtgcgtcagacc
agtttcctagtgcccggtcttaaaatcaccatcgtcgatgagaatgtgccgaaaaccaac
ggggccgatacggtcggcactgagcccaacgaagatgtcgcagtcgtagccgaatcactg
aatacgaacgaaacggctaacgcaaccgagtcattctccggcgaagactccccacttgac
ggattcgccgagctttcggacgatgcgtctgtcgacggcgataccgaggctccggacgag
gaggatttctcgctgtcatccgccactgaagtggttgatggcgcttttggcgaacagcct
gcccatccgcgtacggtcgaattcctgcacaccggtggcgtcaaggatttcgtggacttc
ctgtccaaaggcgagcccatctccgatatctggcgcattcagggtgagggcacctacaag
gaagagacccaggccgtgggcgagggcggcgaactgcatgcccaggagatcgaacgcact
tgcggcgtagacatcgccctgcgttgggtgaatggttacgacaccacgatcatgagtttc
gtgaacatcgtggagacgcctggcggcggtatgcacgtggacggcttcatgaatgctatc
accaagcagattcgcaaggccgtggaagacaacgcccgcaagctcaaggtgaacctcaag
gactccgccatgaaggtggagcgtgacgacatccaggccgggctcgtggccgtggtcacc
gcacgtgtggcagaaccgcagttccaggggcagaccaaggatgtgcttggtaccgcgcag
gtcaagccgatcgtcaccaggctcaccgacaagcagttcggcgagatgatcaccggttcc
aagcgcggctacaaggagcagtccgcccgcgtgctggagaagatcgtcggcgagatgcac
gcgcgtatccagtcgcgcaaggccaaagaggtcacgcgccgcaagaacgcgctcgaatcc
gcttccatgccggccaagctgtccgactgccagccgggcaacgacgacgtggccgaactg
ttcatcgtcgaaggtgattccgcactcggtaccgccaaggccgcccgcaacgccggcttc
caggcgctgctgccgattcgaggcaagatcttgaacgtgcagaaggcctcgatcacacag
atgctgtccaataaggaatgtgcggccatcatccaggtggtgggcgctggttcgggccaa
agcttcgacatcgaacagtcgcgttatcacaagatcatcatgatgactgatgctgatgtg
gatggcgcgcacattcgtattctgctgctgacgttgttttaccggtatatgcgcccgctt
atcgaacatggttacgtgtatgcggccgtgcctccgctgcaccgtatcgcgctgaccggc
tcgcataagggcgaatacatctacacgtattccgatgacgaattggccggcaaactggcc
gacctcgataagaagcgcatcggctacaacgatgatattcagcggtacaagggtctcggc
gaaatggatgccgatcagctggcagacaccaccatggatccgcgcacgcgcatgctgcgc
cgcattcgcatggaagacgccgcccaggcttccgagatcttcaatctgttgatgggtgat
gaagtgccgcctcgcaaacagttcatcgtggataacgccgatgacttcgaccgttccaag
atcgatacctga
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