KEGG   Bifidobacterium breve NCFB 2258: B2258_1143
Entry
B2258_1143        CDS       T03122                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bbrn  Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:bbrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbrn03032]
    B2258_1143
   03400 DNA repair and recombination proteins [BR:bbrn03400]
    B2258_1143
Enzymes [BR:bbrn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B2258_1143
DNA replication proteins [BR:bbrn03032]
 Prokaryotic type
  DNA Topoisomerases
   B2258_1143
DNA repair and recombination proteins [BR:bbrn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B2258_1143
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AHJ21338
LinkDB
Position
complement(1354041..1356392)
AA seq 783 aa
MPKEEYGAKDLSVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGFCNNIV
VTLHTDGSVEVADNGRGIPVDKEPKTGLSGVEVVLTKLHAGAKFGNSSYNAVGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYADADPVNPSPDSPFKRTRKNKPTELEI
IGKVSPKTTGTRIRYWYDPEIFNKTAEFSYEQLIDRVRQTSFLVPGLKITIVDENVPKTN
GADTVGTEPNEDVAVVAESLNTNETANATESFSGEDSPLDGFAELSDDASVDGDTEAPDE
EDFSLSSATEVVDGAFGEQPAHPRTVEFLHTGGVKDFVDFLSKGEPISDIWRIQGEGTYK
EETQAVGEGGELHAQEIERTCGVDIALRWVNGYDTTIMSFVNIVETPGGGMHVDGFMNAI
TKQIRKAVEDNARKLKVNLKDSAMKVERDDIQAGLVAVVTARVAEPQFQGQTKDVLGTAQ
VKPIVTRLTDKQFGEMITGSKRGYKEQSARVLEKIVGEMHARIQSRKAKEVTRRKNALES
ASMPAKLSDCQPGNDDVAELFIVEGDSALGTAKAARNAGFQALLPIRGKILNVQKASITQ
MLSNKECAAIIQVVGAGSGQSFDIEQSRYHKIIMMTDADVDGAHIRILLLTLFYRYMRPL
IEHGYVYAAVPPLHRIALTGSHKGEYIYTYSDDELAGKLADLDKKRIGYNDDIQRYKGLG
EMDADQLADTTMDPRTRMLRRIRMEDAAQASEIFNLLMGDEVPPRKQFIVDNADDFDRSK
IDT
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgcccaaagaagaatacggcgctaaggatttatccgtccttgagggtctggacgcggta
cgcaagcgtccgggtatgtacatcggtaccacggactcgcagggtcttatgcactgcctg
tgggagatcatcgacaactccgtcgatgaggcgttggccggtttttgcaacaacattgtc
gttactctgcacactgatggatcggtggaagtcgcagacaacggccgaggcattccggtc
gataaggaaccgaaaaccgggctatccggcgtggaagttgtcctgaccaagctgcacgcg
ggcgccaagttcggcaattcgtcctataacgcggtcggtggcctgcacggtgtgggctct
tctgtggtcaacgcattgagttcccgtcttgatgtggaagtcgatcgtgacggcaaaacc
catcacatggccttccatcaagggcatcccggcgtatacgcagacgctgatccagtcaac
ccatctccggactcgccgttcaaacgtacccgtaagaataagcccaccgagctggaaatc
atcggcaaggtttcgcccaagaccaccggaacccgcattcgttactggtacgatccggaa
atattcaataaaactgctgaattctcatatgagcagctcatcgaccgtgtgcgtcagacc
agtttcctagtgcccggtcttaaaatcaccatcgtcgatgagaatgtgccgaaaaccaac
ggggccgatacggtcggcactgagcccaacgaagatgtcgcagtcgtagccgaatcactg
aatacgaacgaaacggctaacgcaaccgagtcattctccggcgaagactccccacttgac
ggattcgccgagctttcggacgatgcgtctgtcgacggcgataccgaggctccggacgag
gaggatttctcgctgtcatccgccactgaagtggttgatggcgcttttggcgaacagcct
gcccatccgcgtacggtcgaattcctgcacaccggtggcgtcaaggatttcgtggacttc
ctgtccaaaggcgagcccatctccgatatctggcgcattcagggtgagggcacctacaag
gaagagacccaggccgtgggcgagggcggcgaactgcatgcccaggagatcgaacgcact
tgcggcgtagacatcgccctgcgttgggtgaatggttacgacaccacgatcatgagtttc
gtgaacatcgtggagacgcctggcggcggtatgcacgtggacggcttcatgaatgctatc
accaagcagattcgcaaggccgtggaagacaacgcccgcaagctcaaggtgaacctcaag
gactccgccatgaaggtggagcgtgacgacatccaggccgggctcgtggccgtggtcacc
gcacgtgtggcagaaccgcagttccaggggcagaccaaggatgtgcttggtaccgcgcag
gtcaagccgatcgtcaccaggctcaccgacaagcagttcggcgagatgatcaccggttcc
aagcgcggctacaaggagcagtccgcccgcgtgctggagaagatcgtcggcgagatgcac
gcgcgtatccagtcgcgcaaggccaaagaggtcacgcgccgcaagaacgcgctcgaatcc
gcttccatgccggccaagctgtccgactgccagccgggcaacgacgacgtggccgaactg
ttcatcgtcgaaggtgattccgcactcggtaccgccaaggccgcccgcaacgccggcttc
caggcgctgctgccgattcgaggcaagatcttgaacgtgcagaaggcctcgatcacacag
atgctgtccaataaggaatgtgcggccatcatccaggtggtgggcgctggttcgggccaa
agcttcgacatcgaacagtcgcgttatcacaagatcatcatgatgactgatgctgatgtg
gatggcgcgcacattcgtattctgctgctgacgttgttttaccggtatatgcgcccgctt
atcgaacatggttacgtgtatgcggccgtgcctccgctgcaccgtatcgcgctgaccggc
tcgcataagggcgaatacatctacacgtattccgatgacgaattggccggcaaactggcc
gacctcgataagaagcgcatcggctacaacgatgatattcagcggtacaagggtctcggc
gaaatggatgccgatcagctggcagacaccaccatggatccgcgcacgcgcatgctgcgc
cgcattcgcatggaagacgccgcccaggcttccgagatcttcaatctgttgatgggtgat
gaagtgccgcctcgcaaacagttcatcgtggataacgccgatgacttcgaccgttccaag
atcgatacctga

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