Bifidobacterium breve NCFB 2258: B2258_1162
Help
Entry
B2258_1162 CDS
T03122
Name
(GenBank) tRNA 2-methylthioadenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbrn03016
]
B2258_1162
Enzymes [BR:
bbrn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
B2258_1162
Transfer RNA biogenesis [BR:
bbrn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
B2258_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
AHJ21357
LinkDB
All DBs
Position
complement(1379083..1380534)
Genome browser
AA seq
483 aa
AA seq
DB search
MNEDMMTEAERASIESDEHLTTQERGKGVFHIHTLGCQMNVHDSERIAGVLETDGYVPAT
EEQVNDHDLDLIVLNTCAVRENAAERMYGTVGLWAEMKRQRPNLQIAVGGCMAQLDRQKI
ANKAPWVAAVFGTKNIGDLPQLLNQNRATDTPQVKVDDQLQQFPSQLPAARASRVSSWVA
ISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEVRQCVANGAKEVTLLGQNVNSFGYGIGD
RYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIEAMAETPNVMHQLHMPLQSGSDKIL
RAMRRSYRASKFMTILEKVRQAMSDAQISTDIIVGFPGETEEDFQQTLDVVRQARFSSAF
TFIYSPRPGTPAAEMEQVPHDVVQDRFDRLVALQEQITAENLQSFEGRDVEVMITGTQGK
KDADTHRVTGREKTGVLVHIGVPEGQPMPQIGDFVTATVTHAGRHNLIADPDLAQGQTYS
VRH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacatgatgaccgaggcggagcgcgcctcgattgaatccgatgagcacctt
acaacacaggaacgcggcaagggcgtgttccacatccataccctcggttgtcagatgaat
gtgcatgattccgagcgcattgccggcgtgctcgagacagatggttatgtgccggccacc
gaggaacaggtcaatgaccatgacctcgatctcattgtgctcaacacctgtgcggtgcgt
gagaacgctgccgaacgcatgtatggcacggtgggcctgtgggcggagatgaagcgtcaa
cgcccgaacctgcagattgccgttggcgggtgcatggctcagcttgaccgccaaaaaatc
gccaataaggcgccatgggtcgctgcggtattcggcaccaagaacatcggcgacctgccg
caactgctcaaccagaaccgtgccaccgatactccgcaggtcaaggtcgatgaccagctt
cagcagttcccaagccaactgcctgcggccagggcttcccgcgtgagttcgtgggtggcg
atttccgtgggctgcaacaacacctgcacgttctgcatcgttccgaccacgcgaggcaag
gaaaaggatcgccgtccgggagacattcttgacgaagtgcgccagtgcgtggccaacggc
gccaaggaagtcaccctgctcgggcagaacgtgaattccttcggatatggcatcggtgac
cgctacgccttcagcaaactgttgcgtgcttgcggcacgattgatgggctcgagcgtgtg
cgctttacctcgccgcatccggccgctttcaccgatgacgttattgaagccatggctgag
accccgaacgtgatgcatcagctgcatatgccgctgcagtcaggctccgacaagattctg
cgggccatgcgccgttcctaccgcgcatccaagttcatgacgattctggagaaggtgcgt
caggccatgtcggatgcgcagatttccaccgacatcatcgtcggcttccccggagagacc
gaagaggatttccagcagaccttggatgtcgtgcgtcaagcgcggttctcttccgcattc
actttcatctactcgccgcgccccggcacgccggctgccgaaatggaacaggtaccgcac
gatgtggtccaggatcgtttcgaccgactggtggcgttgcaggaacagatcaccgcggag
aatctgcagtccttcgaaggccgtgacgttgaagtgatgatcaccggtactcagggcaag
aaggatgccgacacccatcgagtcaccggccgcgagaagaccggcgtgctggtgcatatc
ggcgtgcccgagggccagcccatgccgcagattggcgacttcgtgacggccaccgtcacc
catgccggtcgccacaatctcatcgccgaccctgaccttgctcaagggcagacctactcg
gtgcgacactga
DBGET
integrated database retrieval system
