Bifidobacterium breve NCFB 2258: B2258_1439
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Entry
B2258_1439 CDS
T03122
Name
(GenBank) Helicase
Organism
bbrn
Bifidobacterium breve NCFB 2258
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AHJ21624
LinkDB
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Position
complement(1714479..1718555)
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AA seq
1358 aa
AA seq
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MNNGYGVFGHVPDDASHGGGDSDYEDDNAAWGNGLRRRNPWKSANADGDESMLPDDGDFV
GVDDDGNDDVAFGSAGSLSAEDAVVPYSQSRRPGRSVWFDDEDEINGLNEQGVRQVPIAA
LRRDVETSTSNAVLARARVIARKAASMLIDPTYDENRRTGYAELGAMMRGTTSPSSRYRV
NLQFDLDAGEVAGGDCTCPAYGRGYGICKHMAALALMFCDEPQRFKGYHAGAVRPSRALL
DYMERADKQDAQVRARRRSAVMQRFDGGGTAGRGVSSHRNRTGYGSGMGGYQGLRETVSV
GQVRLTPILSFIEGTWSVEFKIGSAINSSSYVLKSIPQFVRAMANGDHEDYGQKLAFTHT
PDMLDADSRPLLRFLKSALAIRHAAEQQDRYYGRIAIDRHLTLSETEVASLLVLRESVGV
QLVLDTWFSSQPSPVSVGGEPNLTMHIVRRDSRMFGSEAGYLLTGTPSVETVINGDRESW
LLLAPSEPLAYTSAMMAKSRRKSAAGYRFVRCPKQFGPIAELIGELFAPDGEGQVIAGDD
SALFARTLLPQLVNVDMLAADDIPRELAELSPAECHVGFYLDRTENGVECEVKARYGNVM
VPLLPAGPAVSADDGGMPVAVPGRDLDTEHLALDVVSEFFSMSEEQRRKLAETRQATAGF
RTPASRAKARARASEAAVINRDDTTQIIRLFDEGLPALHEVGEVFTTPAFDRLIAPKPPS
VKVGLSIKGNLVEISPIADEVPPDEVGALLVSYRRRQRYHQLKDGTLLKLEGANLNTLDT
LAADLDLDEQQLNSGLIELPGGRAFLLDGELPDDGSDVVKDASFTEYIDDLKIIDPKSYE
VPDSLKPVLRPYQVEGFRWLNTLCDKGFGGVLADEMGLGKSVQLIALLLSRYRKPGRADG
TADGAIVEPSLIVCPASLVYNWAAEFAKFAPSCNAMVVAGTKSERRTAIGRAFRADEPTV
LITSYDLLRRDVDDYTADERRFNVMALDEAQYIKNHTTKIAKAAKAVAADHRFALTGTPI
ENRLSELWSIFDFLMPGLLGTYKRFHERYELPISNARAADSSTEEGRAAAQVNPEAARVS
HQLQSLVGVFIKRRLKSQVLTDLPDKLETTLTVQLAGEQRKLYAAHEQRLRMQLEHSEEA
DFNTSKIRILAELTRLRQICCDPRLLYADAKDQSAKLAAIAELVETCVNEGKKALIFSQF
TSFLDLIAERFDAQGLRYYTITGSTPKRKRLELVDQFNADDTSAFLISLKAGNTGLNLTG
ASVVIHADPWWNAAAQDQAADRAHRIGQTEDVNVYQVVAKDTIEERILELQHTKSELARQ
FTDASPLADETGTGTTVFAEAPASIATLTRDDLLDLLG
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaataacggatacggcgtattcgggcatgttcctgacgatgcctcccatggcggcggc
gactccgattacgaagatgacaatgcggcttggggcaatgggctgaggcgtcgcaatccg
tggaagagcgcgaatgcggatggtgacgaatccatgttgcccgatgacggcgatttcgtt
ggtgttgatgatgatggcaatgatgatgtggcattcggctcggctggatcactcagtgcg
gaggatgcggttgttccttatagccagtcacgtcggccgggtcgctccgtgtggttcgat
gacgaggatgagattaacggcctgaatgagcaaggtgtccggcaggtgcctattgcggca
ttacgccgtgatgtggaaacctccacctcgaacgccgtattggcccgtgcccgcgtcatc
gcgcgcaaagcggccagtatgctcatcgaccccacctatgacgagaatcggcgtaccgga
tatgccgaactcggcgccatgatgcgcggcaccaccagtccctccagccggtatcgtgtc
aatctgcagttcgaccttgacgccggggaagtggctggcggtgattgcacctgcccggct
tatggacgcgggtatggcatttgcaagcatatggcggctctcgccttgatgttctgcgat
gagccacaacgattcaagggataccatgccggtgccgtgcggccttcgcgcgcgttgctt
gactacatggaacgcgcggataagcaggatgcgcaggtcagggctcgtcgacgcagcgcc
gtcatgcaacggtttgatggcggcggtacggctgggcgcggtgtttccagccaccgcaat
cggaccgggtatggttccggaatgggcggatatcagggtttgcgtgaaaccgtctcggtt
ggccaggtcaggcttacacccatcctgagcttcatcgagggtacctggagtgtggaattc
aagattggctcagccataaactcctccagctatgtgctgaaatccatcccacaattcgtg
cgggccatggccaacggcgatcatgaggattacgggcagaaactggcgttcacgcatacg
ccggatatgcttgatgcggattcccgcccattgctgagattcctgaaatccgcgctcgcc
atacgtcacgcggccgaacagcaggatcggtattacgggcgtattgccattgaccgtcac
ctgacgctatccgagacggaagtggcttcgctattggttttgcgtgaaagcgtaggcgtg
caactggtgctggacacctggttttccagccagccttcgccggtatcggttggcggggaa
ccaaacctgaccatgcatatcgtcagacgcgattcccgtatgttcgggtcggaagccggg
tatttgctgactggaacgccttcggtggagaccgtcatcaatggcgaccgtgaatcttgg
ctgttgctcgcaccgtccgagcctttggcttacacctccgccatgatggcaaagtcgcgg
cgcaaaagtgccgcaggataccggttcgtccgttgcccgaagcaattcggtccgattgcg
gaacttatcggtgagctgtttgcgccagacggtgaggggcaggtcatcgccggagacgat
tcggctctgttcgcccgcacgttattgccgcaactggtgaatgtagacatgcttgccgcc
gatgatatcccgcgtgaacttgctgagctgagtcctgccgagtgccatgttgggttctat
ctggatcgtacggaaaacggcgtggaatgcgaggtcaaggcccgctatgggaatgtaatg
gtgccgctgctgccggctgggcccgctgtgagcgccgacgatggcggcatgccggtcgcg
gtgcctggccgtgaccttgataccgaacatctggctcttgacgtggtaagtgagttcttc
tccatgtctgaggagcagcggcgcaagttggccgaaaccagacaggcgactgccggattc
aggaccccggcatcccgcgccaaggcccgcgcgcgtgcgtccgaggccgccgtcatcaac
cgtgatgacaccacacagattatccgcttgttcgatgaaggtctgccggcgttgcatgag
gtgggagaggtgttcaccacgcctgcgttcgaccggctcatcgcacccaagccgccgagc
gtcaaagtcggtttgtccatcaagggcaatctggtggagatctcgcccattgccgatgaa
gtgccgcctgacgaggtcggtgccttgctcgtatcctatcggcgtcgtcagcgctatcac
cagttgaaggacggtacgctgctcaaacttgagggcgcaaacctgaatacgcttgatacg
ctggctgccgatcttgatttggacgagcagcagctcaattccgggctgattgaattgccg
ggcggcagagcatttctgctggacggtgaactgccggatgacggttccgatgtggtcaag
gatgcatctttcactgaatacattgacgacctcaaaatcatcgaccccaaatcatacgag
gtgccggacagcctcaagcccgttctccgcccgtatcaggtcgagggcttccggtggctg
aacaccttgtgcgacaaaggattcggtggcgttcttgccgacgaaatgggactgggcaaa
tccgtacagctcatcgccctgttgttgtctcgctatcggaagccgggtcgtgcggatggc
actgcggatggtgcgattgtggaaccttcgcttattgtctgcccggcatcgttggtatac
aactgggctgccgagtttgccaaatttgcccccagctgtaatgccatggtcgttgccggc
accaaatccgagcgtcgcactgccataggccgtgcgttccgtgcggatgagcccactgtg
ctcatcacctcatacgatttgctgcgccgggatgtagacgactacaccgcagatgagcgg
cgtttcaacgtcatggctctggatgaggctcaatacatcaaaaaccacaccaccaaaatt
gccaaagcggctaaggccgtagcggcggaccatcgttttgctttgaccggcacgccgatc
gagaaccgactttccgaattgtggagcattttcgatttcctcatgcccggcttgctcggc
acgtacaagcggttccatgaacggtatgaactgcccatctccaacgcgagagccgcggat
tccagtaccgaagaaggccgtgccgctgctcaggtcaatcccgaggcggcacgggtgtcc
caccaattgcagtcgctggtgggcgtgttcattaagcgcaggctgaagtcccaagtgctg
accgacctaccggacaagctggaaaccacgctgaccgtgcaacttgccggcgaacagcgc
aagctgtatgcggctcacgagcagcgcctgcgcatgcagctcgaacacagcgaggaggcg
gacttcaacacctcgaagattcgtatcctcgccgagctgaccagactgcgccagatctgc
tgcgatccaaggttgctgtacgccgatgccaaagaccagtcggccaagctcgcggccatc
gccgagctggtggagacctgcgtgaacgaaggcaagaaggcgctgatcttctcccagttc
accagtttccttgatctgatcgccgaacgtttcgacgcgcaaggcctgcgctactacacc
atcaccggttccacgcccaaaaggaagcgcctcgaactcgtcgaccagttcaacgcggac
gatacgtccgctttcctgatttcattgaaggctggcaacactggtctgaacctcaccggc
gccagcgtggtcatccacgccgacccatggtggaacgccgccgcccaggatcaggccgcc
gatcgagcccatcgcatcggccagaccgaagacgtcaacgtgtaccaggtggtggccaag
gacaccattgaagaacgcatcttggagcttcagcacaccaagagcgaacttgcccgccag
ttcaccgatgcctccccgctcgccgacgaaaccggcaccggcaccactgtctttgccgaa
gcccctgcctctatcgccaccctcaccagggacgaccttctcgatctgttgggatga
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