Bifidobacterium breve NCFB 2258: B2258_1449
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Entry
B2258_1449 CDS
T03122
Name
(GenBank) Helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_1449
03029 Mitochondrial biogenesis [BR:
bbrn03029
]
B2258_1449
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
B2258_1449
DNA replication proteins [BR:
bbrn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
B2258_1449
Mitochondrial biogenesis [BR:
bbrn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
B2258_1449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
Viral_helicase1
AAA_16
DEAD
nSTAND3
AAA_5
SH3_13
NTPase_1
TrwB_AAD_bind
AAA
SLFN-g3_helicase
MeaB
IstB_IS21
AAA_14
Herpes_Helicase
AAA_24
cobW
KdpD
ABC_tran
NAT10_TcmA_helicase
Zeta_toxin
AAA_25
AAA_7
TsaE
NPHP3_N
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AHJ21632
LinkDB
All DBs
Position
complement(1729962..1731380)
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AA seq
472 aa
AA seq
DB search
MRQTEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQ
TIHSWSGVGVATSLTSSLLKLIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVR
RDPRPFGGIQVVLSGDLFQLPPVSVSGRNRDLIEPTPEFIASRERYARAGLNPESFITES
LVWQELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDALVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMA
LRNDPDRQYVNGSLGTVRGFAQENKGGWPIVEFENGNIVTMKQAKWEMMDGETVLASVAQ
VPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLV
SPDAVVLDGDLREASASASDQLADEGAGAFKPTEPDEFAADPNDEFAQDALF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaaccgaagccctggccattctgaacgccggcgcgaacgtgttcctgaccggt
gcgcccggtgccggtaagacctacgtgctcaacgagttcatccggcaggcgcgtgccgac
ggggcgagcgtggccgtcactgcgtccacaggcatagcctccacgcatatcaatggccag
accattcactcatggagtggtgtgggtgtggcgacaagtctgacctccagtctgctcaag
ctcatcaaatcccgccgcaaacgcaagattcaggccacggatattctcgtcattgacgag
gtctccatgctgcacgcctggctgtttgacatggttgaccaagtctgccgcgaggtccgt
cgcgatccacggccgttcggcggcatccaggtcgtgctgtccggagatttgtttcagctg
cctccggtctcggtatccggccgcaaccgcgacctcatcgaacccacaccggaattcatc
gccagccgtgaacggtatgcccgtgccggtcttaatccggaaagctttatcaccgaatcg
ctggtgtggcaggaactcaacccggtgatctgctacctcaccgagcagcatcgtcaagac
accggtgagcttctgaccgtgcttactgacattcgcgaaggcgacgtgacccagtccgac
cgtgacgcactcgtcacgcgtttgggcaagctgcccgagcccggccaagtggccgtccat
ctcttccccgtgaaccgtcaggccgacaatctcaacgacatgcggctgaaccagatcatg
ctcgagcctcatgagttccatgccgaaactgcaggaccggccaatctggtcgatcggctc
aagaagaacatgctcgcccccgagcggctcgtgctcaaggaaggcgcggccgtcatggct
ctgcgcaatgaccccgaccgccagtatgtcaatggttcgctcggcactgtgcgcggtttt
gcgcaggagaacaaaggcggttggccgattgtggaattcgagaacggcaatatcgtcacc
atgaaacaggccaagtgggagatgatggatggcgagacggtgctcgcttccgtggctcag
gtgccgttgcgctgcgcgtggggcatcaccatccacaagtcacagggtatgacgctcgat
cgcgcggttatggacttgaagaggaccttcgcgccgggcatgggatatgtggcgctctcc
cgagttgaatcattgggcggactgtatttggctggtgtcaacgagcgcatgttccttgtc
tcacccgatgccgtggtgcttgacggcgacctgcgcgaggcctcggcctcggcctccgac
cagttggccgatgaaggcgcaggcgcattcaaacccaccgagccagacgaattcgccgcc
gatcccaatgacgaattcgcccaagacgccttgttctga
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