Bifidobacterium breve NCFB 2258: B2258_1617
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Entry
B2258_1617 CDS
T03122
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_1617
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B2258_1617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
ABC_tran
Lon_C
ChlI
AAA_16
DUF7125
Rad51
SLFN-g3_helicase
RsgA_GTPase
EAD2
nSTAND_NTPase5
AAA_22
NACHT
AAA_19
Isochorismatase
VVA0879
NTPase_1
nSTAND3
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AHJ21794
LinkDB
All DBs
Position
1917377..1918876
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AA seq
499 aa
AA seq
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MAKSSVQYVCSECGWNGTKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAA
VPDTARAAAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ
TAGNIARAVAEGQTINAAGRGQSSHRSSGLASTRAHTVLYISGEESQAQVRLRATRINAV
EPNLLLAATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDT
AKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFGPTDEV
GCFDMSGEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALVTNS
VLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVGAL
ASAATSKPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVHVDGL
KLVEASTLADALHALGVRK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaagtgtgcagtacgtgtgttccgaatgcggatggaacggcacgaagtgg
tatggccgttgccctgaatgtgggcaatggggaacggtcgaggagtttcatgaagcccgt
ccggctgcgggttcacacaccgctgcgcccgggcggacatcacgcacacgatcggcggcc
gtgccggacaccgcgcgtgccgcagccaagccgattaccgaaatcggtacggaaaccgtg
gaacgcttgggcacggggttttccgaattcgaccgtgtgctgggcggcggcgtagtgccg
ggttcggtaacgttgattgccggtgagcccggcatcggcaagtcaacactgctgctgcag
acggccggtaatatcgccagggcagtggctgaaggccagacaatcaacgctgctgggaga
ggccaatcatcgcatcggtcttccggattagcctcgactcgcgctcacacggtactctat
atttccggtgaggagtcacaggcacaggtgcgtctacgcgccacccgcattaatgcagtg
gaaccgaatctactgcttgccgccaccaccgatctggctaccgtattgggcttaatagag
cagaacaaaccggcactggccatcgtcgattcggcacagaccattgtttcgcaggaagtc
gatggcatctcgggcggttccacacaggtgcgagaggtggcaagcgccctgatcgacacc
gctaaaactctcgatatccccgtgtttttggtgggtcatgtgaccaaggacggctcaatt
gccgggcctcgtaccctcgagcatttggtcgacgtggtctgccagtttgagggagacagc
gaaacggccctcagaatgctcagagcagcgaaaaaccgttttggcccgaccgatgaggtg
gggtgcttcgacatgagcggcgaaggcatcgaagaagtcaccgaccccgccggactgttc
ttgtccggagatggcccggaatcagccaatgacgctcccgtggagggcacatgcgtgaca
ttcacgctggacggccatcgcagcctgcctatcgaagtgcaagcattggtcaccaattca
gtgctgcctacgccaaggcgtgccgtcaatggcgtggatcccagccgcattgccatgttg
gtcgccgtgctgtaccggcacagcaaactcaatctgctttccaacgatctgtatatttcc
accattgccggaggtcaggccaaggagcccggttcggatctggccattgttggagcgctg
gcaagcgcggccacatcgaagccgattgcccgctccacctgtgccatcggagaaatatcg
ttgaccgggcaggttcgtcctgtaccgcgcatggaatatcgtttgcgcgaggcagcacgc
ctcgggttcactacggcggtcattccacccttgcgcaaaccggtgcatgttgatgggctg
aaactcgtcgaggcgagcacgcttgccgatgcgcttcatgcattaggcgtacggaagtaa
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