Bifidobacterium breve NCFB 2258: B2258_1629
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Entry
B2258_1629 CDS
T03122
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B2258_1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrn03021
]
B2258_1629
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_1629
Enzymes [BR:
bbrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B2258_1629
Transcription machinery [BR:
bbrn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B2258_1629
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B2258_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHJ21806
LinkDB
All DBs
Position
complement(1933220..1934215)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVQEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPSGVTIAN
PEQHIATLAEDGELEIEFTVERGRGYVPAQMNKQDTDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNAQAEGVEVGPAPVA
EETNPEMVVPIEDLNLTQRSYNCLKREGVHTIGELVSHTEQDLLDIRNFGMKSIDEVKEK
LQTLGLSLKSSPMAFDTNNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgactctgaccgaggaatctctgaatccgcagcgctctcgc
ttcaccatcgagcctctcgagcctggcttcggctacacgctcggtaactcgttgcgtcgc
acgctgctgagttcgatcccgggtgctgccgtgacctccgtgcgtatctccggagccctg
catgagttcaccactctgccgggtgttcaggaagacgtcaccgagatcctgctcaacatc
aagggcatcgtgctcaccagcgagtatgacgagcctgtggtcatgtacctgcgcaagagc
ggcaagggcgaggctactgccggggacatcaccccgccgtctggcgtcaccattgccaat
ccggagcagcacatcgctaccctcgccgaggacggcgaactcgagatcgagttcaccgtt
gagcgtggccgtggctacgtgcctgcccagatgaacaagcaggacaccgatgagattggc
cgtattccggtcgattccatctactccccggtgctcaaggtgagctacaaggtcgaggcc
acccgtgtggaacagcgcacggacttcgacaagctcattctggacgtggagaccaagccc
gccatctccccgcgtgatgcggtggcttccgccggttcgaccctggtggagcttttcggc
ctgtgccgcgagctcaatgcccaggctgaaggcgtcgaggtcggtccggccccggtggcc
gaggagaccaaccccgagatggtcgtcccgattgaggatctcaacctgacgcagcgttct
tacaactgcctcaagcgtgagggtgtccacaccatcggtgagctcgtctcccacaccgag
caggatctgctcgacatccgcaatttcggtatgaagtcgattgacgaagtcaaggagaag
ctgcagactctgggtctgagcctcaagtcttcgccgatggccttcgacaccaataacctc
gaaggcggcaccttcttctcgccggaagacgagtga
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integrated database retrieval system
