Bifidobacterium breve NCFB 2258: B2258_1896
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Entry
B2258_1896 CDS
T03122
Name
(GenBank) Cell surface protein with gram positive anchor domain
Organism
bbrn
Bifidobacterium breve NCFB 2258
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Ortholog
Paralog
GFIT
Motif
Pfam:
Gram_pos_anchor
Glug
DUF3159
Motif
Other DBs
NCBI-ProteinID:
AHJ22063
LinkDB
All DBs
Position
complement(join(2264203..2272245,2272244..2272312))
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AA seq
2703 aa
AA seq
DB search
MVPAAYAQNIDNVSSSPNAVISGGGGNTVVAAPSARNVNVDDKTSEEANTSNGAPTPSET
NQDAQQDSSPSSSTTGDSSESSNGATDNKADDSAEATAGNSANDGAQTQAPNDASSQDAK
NDSSNATDQSPAKANVQVAATALGGRDFEGQVTKEINGKTYILIGNEQQLRAIGSGKKVI
GRINKVKQTCTRQGPLNYQWVDGTPSSEYAGDADLSSSDTLRDADASDHDSSLLACTALI
VNRTRTKYYGVGADGTQKDYSAANTGLTYSADANYLIFRDIDLSKNAADTNNTEWTPLMF
SGTMLGAVSNDGDTAASLWKAVGADGASVVHATAARPVISHVVVNQKDMVSNVKGDQLDV
SKQQGIGFFASITNKTVMNSNSLGSAGTAVVSNLKLQDVSVANHTSESYIPPTLLGMLTS
AVGSLLDVLLKALKLLTFGQVNLDLNLQGLLTLHKDNPSNLATGAFAGRIYGDTKVTDCE
VADVSVSSVSRMTGGFVGYVEGATRYDAVSGIVGALTKLLSGILNIIPFLGLGDLVDWLL
SGTLGLNALIPVGYYNPVISNSSVNGFKENVVIGNKDNPQAGGFVGAQIGAIIENSSVTS
TNGFTVRATQYAGGFAGVSRNGNVGGLINSLGVDLLSALRPQSLIENSGLTVNGDDKITV
QAEDYAGGFNGAMANAYAVNNSITASVAVTADRSHAGGSTGFASVGWGLELGTDDTTKAS
LLKQLTKAVTKLLSGSNNGAGELLSIVGVNPSAILGTQMKGSLTVAAGGDYAGGLVGEGS
GTVIGDSSQNCLQKLTFWKYNNHRDFPQQRSTTIEGLESVTATGSYAGGIAGNLQPTTVA
GLLNSVVKIGDIATLKKFDQFAAFTVENMSVTAPASGLTVTAGSYYAGGAIGCATGGDVT
NTNLTNLATVSAKGEAGGFIGFSGPGDAIGAGGLNVLGLIKLSGLLSVAQYSSVAVTASN
VNGISGGFTVAATGKNENNETTDYAAGGFYGQANSTKTRESHVTNLKSVTADTSTSDGVA
GGFVGFSTTGGLADALSNAKDSSVLDDLIKGGLLSVNDLLGAVPYLIPSYTDTTVTYVNG
GYVEGDIAGGYAGNFQSGKVNQFSETDLKNDSTLAGVQSRVQTTPVAVVNLDHVTGGAYA
GGFGGKVVSGALASAGNGGLSLLGKFGTVDLANLLQVVQGYVPFISYAGVHSDATTVETT
SGNKISDPDDPGFTVSATRFDQSDTQSGSAGGYIGYGSGVQVSHSSVTQLRRTDVKAPKN
LETAGSINSTYLSKDSTYAVTAARYAGGYIGKMDIGSAAAVGGGLSLLGQKVNLNDVLSV
LDVVVSTIEHSDVTGGIGGYSVLASAADHRNANNEPDPLGMAGGFAGDIEGGHIQDSSSH
EFVYIIGQVSAGGYVGTMQPGSVANVLGDGSVLKKLVNLDDLLSLVQDFVPTIRNSSTDA
AVCGGAVRAQAASDTTTRRGMAGGYAGRNRGGHIWGNNTAAWKQENTDGKYNGPQRVAYA
ARIRSVYGAEIAGGYTGFMEAADTAQGGSLSLLGGLIKAGNLAGVLSVVYPTEEHSKVTG
PLRNMSYDQWKTWVDNIGKYGAYGKEFTEVATGDGAGSVTDQDSLDKFLESYIFGFNVVA
GRAEYKTGANLHDSGVAGGHVGLMRTGTITDGQSMDVKTVSAMRAAGGYAGTMESGSASS
FGSIQLFGDKGIKLDLGQMLDVAQVFVPVVKSSSVAGYRKGMKVVATGEDITHGTGNAGG
YAGLAVGGQIWGDLGQNGQKLVKGVTAAGANVSNLRKVEGRNNVGGFIGVATAGAVADVD
TNASEGFLQGILDSLVSNPASLVSVLQATVTTIRGAHVSSDDPAWGYTVDGAYESKDDKG
NTTTKYALNAGGFAGSLQAAILGDKDSAKGTGSEADPNNDPASLTVNGLRAVEGGQYAGG
FFGLADISSVASVGGGEAGDKQNTNLLLKLLKVGNVGVLEAFRTFIYDGQVNGVSDGIQI
VAHDSTTKGMLDSKRYTGAAGGFGGGLINGSVKQSAVTNLNSVTGVNYVGGFIGHLGKSG
TVAADNAQLGTDALNLLGATAGVLDIWGSHVGDSRVTGIPDGYTVTATHHGDNYGKATDK
ATGREVAGGFVGYVDLARVKGCASDNLKKVTSGEIAGGFVGETSRAYLVDAKVNSVLVEL
LLQVVNALVKLLYLDKAEQVGVIDLGKWFPAIFGKVFDLKVLSEGNVLYVNLFGLKVSVA
LSKADDENQQQTDVAIVTIGDSVIKLPCSKDGIDMDGSGSNLTVQLIKGNRTRVEQSTVT
GIASGYDVFGGGATQDTDGVKDLSTGYTGGFAGLNDEGVLADDHMVYADTIRGASGLVDP
FSNTKLKSVWDFNTMSDILGPVDDGNGDKAYNTYRIYRKAAANASEARTSAQDGNKIFSQ
KNTADDALNTGLDRWEVKLFDVVNTYDSSAVHSSASGDAGTTWVGIKDAVVDSTDGSTKT
KLGAYQSPAKAVLMLDATVTDNNGGLTPEPDDGQDPCGKDGCRTIDLTVQKVWKDGNLER
PQSVELKIAAHYTDGSGNTVTPQTIQCFGADCTTVTQKNPWTVTLDSSDASSWSNTWRKV
IQGLPVAFVDGQDANGKDIVRYYTYTVEETAVTYKDGDTTKTIKPAEAGYQVSVSYNTKE
RVAIVTNAALLPDTGGAGTMWFLMFGLLLMGAGVVWYVRNQRVQSGTVRSGSSRIRKRGA
HAA
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctgcagcatatgctcagaatatagacaatgtgagtagctctcctaacgccgta
atttcggggggggggggtaatactgtcgtagctgctccttctgctcgcaatgtcaacgtt
gacgataagacgtcagaagaggccaatacatcaaacggtgcgccaacaccttccgaaacg
aatcaagacgcacagcaggattcatctccttcatcttctactactggtgattcttccgaa
tcctcaaatggtgcgacagacaataaggcggacgactcagcagaagctaccgctggcaat
tccgctaatgatggagcccaaacgcaggctccaaacgatgcttcttctcaagatgccaag
aacgattcctcaaatgcgacggatcaatcgccggcgaaggccaatgtgcaggtcgccgcg
acggcgcttggcggccgtgactttgagggtcaggtcaccaaggagatcaacggcaagacc
tacatcctgattggtaacgagcagcagctgcgtgcgattggttctggtaagaaggttatt
ggccgcatcaacaaggtcaagcagacttgcacgcgacaaggacccctcaattatcagtgg
gtggacggcacgccgtcttccgaatacgccggtgacgccgatctctccagttcagatact
ttgcgcgatgctgatgcctccgaccacgacagttcactgctggcatgcacggcgttaatc
gtcaacaggacccgcaccaagtattacggcgtgggtgctgatggcacgcaaaaggactac
tccgctgccaacactggcctgacctattccgcagacgccaactacctgattttccgtgac
atcgacctgtccaagaacgcggcagataccaacaacactgagtggactccgctcatgttc
tccggcactatgctcggtgcggtctccaatgacggcgacaccgcagccagcctgtggaag
gctgttggtgccgatggcgcaagcgtggttcacgctaccgcagctcggccggtcatcagc
catgtggtcgtcaatcagaaagatatggtctctaatgtcaaaggcgatcagctggatgtc
agcaagcagcagggcatcggcttcttcgcctcgatcacgaacaagaccgtgatgaacagc
aacagtctgggcagcgccggtacggccgtggtgtcgaacctcaagctgcaggatgtgtcg
gtggcgaatcatacgagtgaatcgtatattccgccgaccttgctcggtatgctcacttcg
gcagtgggatcactgctcgacgtactgttgaaggcgttaaaactattgacattcggacaa
gtaaatcttgacctcaatcttcaaggtctgctcaccctgcacaaagacaatccttccaac
ctcgccacgggtgcatttgccggccgtatctacggggacaccaaggttacggactgcgag
gtagcagatgtttcggtatctagcgtaagccgtatgaccggtggtttcgtgggatatgtt
gagggcgcaacccgatacgatgcagtctccggcatcgtaggagcgctcaccaagttactc
tcggggattctgaacatcatcccgttcctcgggctgggcgatttggtggactggttgctg
tccggcacgctcgggctgaatgccttgattccggttggctactacaacccggttatctcg
aatagttcggtgaacgggttcaaagagaacgtggtgatcggcaacaaggacaacccgcag
gccggcggctttgtcggtgcgcagattggtgcaatcattgagaactcttcggtgacgagc
acgaatggtttcaccgtgcgggcaacgcaatatgccggtggttttgccggagtaagccgc
aacggcaacgtgggcggtctgattaactcgcttggcgtcgacttgctgtctgcgctgcgt
ccgcagagcctcatcgaaaacagtggcctgacggtaaacggtgacgataagatcaccgtg
caggccgaagactacgccggcggcttcaacggtgccatggccaatgcctatgctgtcaat
aattcgattacggcttcggtcgccgtgactgccgacagatcccacgccggaggatccacc
ggattcgcctccgtgggatggggcctggaactcggtacggacgataccacgaaggcatcg
ctgttgaaacagctcaccaaggctgtgactaaattgctgagcggcagcaataacggtgca
ggagaactgctatccatcgtcggtgtgaatccttctgcgattctcggtacacaaatgaag
ggttccctcacagttgctgccggcggtgattacgcgggcggccttgtgggcgaaggttcg
ggtacggtgatcggtgattcctcgcagaactgccttcaaaaactcacattctggaagtac
aacaatcatcgtgacttcccacagcagcgttccaccaccatagaaggccttgaatcggtc
acggccacgggctcctacgcgggtggcatcgccggcaatctgcaaccgacaacggtagct
gggttgctcaacagtgtggtgaaaattggcgatattgccacgctcaagaagttcgaccag
tttgccgcgttcaccgtggagaacatgtctgtcaccgctccggcatccggcctgacagtg
acggctggttcatattatgcaggcggtgccatcggatgcgccaccggcggcgacgtgacc
aacacgaaccttaccaatctggccacggtctcggccaagggagaagccggcggttttatt
ggcttctctggaccaggcgacgccatcggcgctggcggtctcaatgtgcttgggcttatc
aagctttccggtctgctatcggttgcccaatattcttcggttgcagtcactgcatcgaac
gtgaacggcatctctggcggattcacggttgcggcaaccggcaagaacgagaacaacgaa
acaaccgattacgctgcaggcggtttctatggtcaggccaacagcaccaagacccgggaa
agccatgtgacaaacctcaaatcggtcacagccgataccagcacgtccgatggtgtggca
ggcggtttcgtgggcttctctaccaccggcggcctcgccgacgcgctcagcaacgcaaaa
gattccagcgtattggatgacctgatcaaaggcggcctgctgtccgtgaacgacctgctc
ggtgccgtaccgtatctgattccaagttatacggataccaccgtgacgtacgtcaacggc
ggttatgtcgaaggcgatatcgcgggcggctatgcgggaaacttccaaagcggcaaggtc
aaccagttctccgaaaccgatctcaagaacgactcaacgctggccggtgtacagtcccgc
gtgcaaaccacccccgtggccgttgtcaaccttgaccatgtgaccggcggcgcatacgca
ggtggtttcggcggcaaggttgtctccggtgcgctcgcttcggctggcaacggcggcctg
agtttgctcggcaaattcggtacggtggatctcgccaacctgttgcaggtagtgcagggc
tatgtgccattcatctcctacgcgggtgtgcattccgatgccaccaccgtggagacaact
agcggtaacaagatttccgacccggatgatcccggcttcaccgtttccgccacccgattt
gatcagtccgatacgcaatccggttccgccggcggctacatcggatacggttccggtgtg
caggtgtcccattccagtgtgacccaactgcgccgtactgatgtcaaggcaccgaagaat
ctggaaaccgccggatcaatcaatagcacctatctgagcaaagacagcacatatgcagtc
accgctgcgcgatacgccggcggttacatcggcaaaatggacatcggctcggcggcagct
gtgggcggtggcctgagcctgctcggccagaaagtcaatctcaacgatgtactcagtgtg
ctggatgtcgtcgtctcgacgattgaacactccgatgtgactggcggcatcggcggatac
tccgttctggccagcgccgcagatcataggaatgccaacaatgagcccgatccactgggt
atggctggtggtttcgccggagacatcgaaggcggccacattcaggactcgagctctcat
gagttcgtatacatcatcggccaggtttcggccggcggttacgtgggtaccatgcagccg
ggatccgtggcgaacgtgcttggtgacggcagcgtgctcaagaagcttgtcaacctcgac
gacctgctctcgctcgtgcaggacttcgtgccgacgattcgcaacagctcgaccgatgcc
gcagtgtgcggcggcgcggtgcgtgcccaggcggcatcggatacgaccacacgccgcggc
atggccggcggctatgccggtcgtaatcgtggcggtcatatctggggcaacaacacagca
gcgtggaagcaggagaataccgacggcaaatacaacgggccgcagcgcgtagcctacgcc
gcgcgcatccgcagcgtatacggtgccgaaatcgccggcggttacaccggcttcatggag
gcggccgataccgctcaaggcggttcgctctccttgcttggcggtctcatcaaggccggc
aatctcgctggcgtgctgtctgtggtctacccgaccgaggagcactcgaaggtcactggt
cctttgcgcaatatgagctacgaccaatggaagacgtgggtcgacaacatcggcaagtac
ggtgcgtatggcaaggaatttaccgaggtggctacgggcgatggtgcgggctctgttact
gatcaggattccctggacaagttcctcgaatcctacatcttcggattcaacgtcgtcgcc
ggtcgtgcggagtataagactggcgcgaacttgcatgattccggcgtcgccggcggacac
gtcggtctgatgcgcaccggcacgatcaccgatggccagtcgatggacgtcaagaccgtc
tctgccatgcgtgcggcaggcggttatgcgggcacgatggaatccggctcggcatcctcg
ttcggctctatccaactattcggcgacaaaggcatcaaacttgatttgggacagatgctc
gacgtggcacaggtatttgtgcccgtcgtcaaatcttcgagcgtggccggctaccgcaag
ggtatgaaggtcgtggccaccggtgaagacatcacgcacggtaccggtaatgccggaggc
tatgccggtctcgcggtcggtggccagatctggggcgatctcggccagaacggccagaag
cttgtcaagggtgtcaccgctgccggtgccaacgtttccaacctgcgcaaggtggaaggg
cgcaacaatgtcggcggatttatcggtgtggccactgccggcgcggttgcggatgtggac
accaatgcgtccgagggattcctgcaaggaatcctcgactcgctggtatcgaacccggca
agtctggtcagcgtattgcaggccacggttacgacgattcgcggtgcacatgtgagctcg
gatgacccggcatggggatacacggtcgacggcgcatatgagagcaaggacgataagggt
aataccacaaccaagtatgccctgaacgccggcggtttcgctggttcgttgcaggccgcg
atcctcggtgacaaggattccgccaaaggcaccggcagtgaagcggatccgaacaatgac
ccggcttctcttactgttaacgggctgcgcgctgttgaaggcgggcaatacgccggtggc
ttctttggccttgctgatatatccagcgtcgcttccgtcggcggcggcgaggccggcgat
aagcagaataccaacctgctgctcaaactgctcaaggtcggcaacgtgggcgtgctcgaa
gcattccgcaccttcatctatgacggtcaggtcaacggtgtgagcgacggcatccagatt
gtcgcccatgattccaccacaaagggcatgcttgactcgaagcgttacaccggtgcggcc
ggtggcttcggcggtggactgatcaatggctctgtgaagcagtctgcggtcaccaacctc
aacagtgtgaccggcgtgaactatgtgggcggcttcatcgggcatcttggcaaatccggc
acggtcgccgccgacaatgcacaactcggcacggatgcgctcaatctgcttggtgccacg
gccggcgtacttgacatctggggctcgcacgttggcgattcgcgcgtcaccggcatcccg
gacggttataccgtcaccgccacacaccatggcgacaattacggcaaagccaccgacaag
gctaccggacgcgaggtcgcaggcggttttgttggatacgtggatttggccagggtgaag
ggctgcgcgtctgacaatctcaagaaggtcactagcggtgagattgccggcggattcgtc
ggtgaaaccagccgtgcctatttggttgacgcgaaggtcaactctgtacttgtggaactg
ctgctgcaagtggtgaacgcgctggtcaagctcctgtacctcgacaaagcggaacaggtc
ggcgtcatcgatttaggcaagtggttcccggccatcttcggcaaggtattcgatctcaag
gtgctttcggaaggcaacgtgctgtacgtgaacctgttcggactgaaggtgagcgttgct
ctgtccaaggctgatgatgaaaaccagcagcagaccgacgtggcgattgtcaccatcggc
gatagtgtcatcaaactgccttgcagcaaagacggcattgatatggatgggtcgggcagc
aacctgaccgtccagctcatcaagggcaaccgtactcgcgtggaacagtccaccgtaacg
ggcatcgccagtggctatgacgtgttcggcggaggggcaactcaggataccgacggtgtg
aaggatctttccacaggctacacgggcggcttcgccggactgaacgacgagggcgtgctg
gcagacgaccacatggtctacgccgacacgatccgcggtgccagcggactggtcgacccg
ttctcgaacaccaaactcaagtccgtatgggacttcaacaccatgagcgacatcctcgga
ccggtcgatgacggcaacggcgacaaggcatacaacacctatcgcatttaccgcaaggcg
gccgcgaacgctagtgaggcccgcacctccgcacaggacggcaacaagatcttctcgcag
aagaacacggcagacgatgcgctgaacaccggactcgatcgttgggaagtgaagctgttc
gacgtggtcaacacatacgacagcagcgctgtgcacagctccgcatccggcgacgccggc
accacttgggtcggcattaaggacgccgtggtcgactccacggacggcagcaccaagacg
aagctcggtgcctaccagtccccggccaaggccgtgctcatgctcgacgcgaccgtgacc
gacaacaacggcggactcacccccgaaccggacgacggccaggacccgtgcggcaaggac
ggttgccgaaccattgacctgaccgtccagaaggtatggaaggacggcaacctcgaacgg
ccgcagtcggtcgaactgaagatcgccgcgcactataccgatggcagtggcaatacggtg
acgccgcagacgattcaatgcttcggcgcggattgcacaaccgtgacgcagaagaatcca
tggacggtgacgttggactcctccgatgcctcttcctggagcaacacctggcgcaaggtg
attcaaggactgccggtcgcattcgtggatggacaggatgccaacggcaaggacatcgtg
cgttactacacgtacaccgtggaagaaaccgccgtgacctataaggacggcgataccacc
aagaccatcaagcccgcggaggccggataccaagtatcggtctcctacaacaccaaggaa
cgcgtggccattgttaccaatgcggcgttgcttccggatacgggaggcgcgggcacgatg
tggttcctgatgttcggcttgctgcttatgggagctggcgtggtctggtatgtgcgtaat
caacgcgttcaatccggcacagtccgctcgggctccagccgtatacgaaagcgaggtgcc
catgccgcgtga
DBGET
integrated database retrieval system
