Bordetella bronchialis: BAU06_01460
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Entry
BAU06_01460 CDS
T04591
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bbro
Bordetella bronchialis
Pathway
bbro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAU06_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbro03400
]
BAU06_01460
Enzymes [BR:
bbro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BAU06_01460
DNA repair and recombination proteins [BR:
bbro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAU06_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANN69321
LinkDB
All DBs
Position
322808..326731
Genome browser
AA seq
1307 aa
AA seq
DB search
MDVLRFPLHGSRLIEASAGTGKTFTIATLYVRLVLGHGGEQGYDRPLMPPQILVVTFTEA
ATQELRDRIRARLAQAAACFLADPDSVVERPPGEDPLHDLRADYPPASWAACARKLQLAV
EWMDEAAVSTIHGWCNRMLREHAFDSNSLFQQTLEQNTAPLMAEVVRDYWRAHIAPLDAI
SAAEVRAWWPGPEELQAQLLPVLRFAPELKAPGQAGLAHGLDDAGAAAGAEADGAGRAPC
DLLRTARQRRQAQLGRLKAPWLSWLPELRRLFDEGVSAKRVNGRQIQARYYESWLENLRA
WCEDPDARIPQLTETAWLRLGPGLDEAWKGDPPDHPAFAALAELREQTRALPEARHDVLR
HAADWVSRRFAGEQAQRAQMSFDALLDQLDAALAGPSGAALAETLRRQFPVALIDEFQDT
DPVQYRIFDAVYRVADNDKGSALILIGDPKQAIYGFRGADIFTYLRARAAVAGRLYVLGR
NFRSSVPMVRAVNHCFLAAERRPEGEGAFLFRRRDANPVPFIPVQANDRPDRLVVAGTAT
PALTMWWLPRAEDGKPMGAGAYVETMADACAGEIARLLTLSQQGSAGFAPRDAVPASASP
EGPAALRQAPGPAATPLSTAILAPLRPADIAVLVDTGRQARAVRRALSRRGVRSVYLSER
QSVFASPQAGEIEFWLRACAEPDDGRALRAALATPTLGVPWQELDRVGQDELEWEARVQQ
FRGYARCWREKGVLPMLRRLLDDFGVPARQLSAGEDPGQAAGDGERVMTDILHIAELLQQ
ASTQIDGEHALLRHLAEMRHAAAQGEENDALTIRLESDADLVRVITVHKSKGLEYPLVFL
PYAAAFRPVRPDAVPLSWHDEDGELKVSLVPDAHGHARADRERLGEDLRKLYVALTRARY
ATWVGVAPLADLQASALGYLIGKGQAGQDEPLADVLEAWRDGHADIALREAPAPGEIRYR
ADAVGRAAPGPAGGARTMRRTVRDPWWVASYSSLRTARDGAMEAEPETAREDVFLEAAES
DNPASAAGDGSVDTRGMAVRSPPGTVPSAARDARGALHAFPAGAQAGTFFHELLEWAAAQ
GFATVAGQPEAARLAVARLCEVRNWSDWTEPLTAWLLDTVARPMALPGMPGQAVPPVALA
GVGGYIAEMEFWLGADNVDVTRLDRIVRAHTLEQAPRPALEPGRIHGMLKGFIDLVFEHQ
GRYYVLDYKSNRLGDDDSAYTQAAMRQAMLGHRYELQYALYLFALHRLLRSRLPDYDYDR
HVGGAAYVFLRGTRAPQGGVFVDRPPAAMVQALDRLFAAAPAREEAA
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
ctggatgtgctgcgttttccgctgcatggcagccggctgatcgaagcgagcgccggcacc
ggcaagacctttaccatcgccacgctgtacgtgcggctggtgctgggccacggcggcgaa
cagggatacgatcgcccgctgatgccgccgcagatcctggtcgtgacctttaccgaggcc
gcgacgcaggaactgcgcgaccgcatccgcgcccggctggcgcaggccgcggcctgcttc
ctggcggatccggacagcgtcgtcgaacgcccgcccggcgaggatcccctgcacgacctg
cgcgccgactatccccccgcgagctgggcggcctgcgcgcgcaagctgcaactggcggtg
gaatggatggacgaggccgcggtctccaccatccatggctggtgcaaccgcatgctgcgc
gagcatgccttcgacagcaacagcctgttccagcagaccctggagcagaacaccgcgccc
ttgatggccgaggtggtgcgcgattactggcgcgcccatatcgccccgctggacgcgatc
tcggcggcggaagtgcgcgcctggtggcccggtccggaagaattgcaggcgcagttgctg
ccggtgctgcgcttcgctccggagctgaaggcccccggccaggccggcctggcccacggg
ctggacgatgccggcgcggcggccggcgcggaggcggacggggccggccgcgcgccttgc
gatctgttgcgcaccgcgcggcagcggcggcaggcgcaactgggtcgtctcaaggcgccc
tggctatcctggctgccggaactgcggcgcctgttcgacgaaggcgtgtcggccaagcgc
gtcaacggccggcagatccaggcgcgctattacgagtcctggctggagaacctgcgcgcg
tggtgcgaggaccccgacgcccgtatcccgcagttgaccgaaacggcctggctgcggctg
ggccccggcctggacgaggcatggaagggcgacccgcccgatcaccccgccttcgccgcg
ctggccgaactgcgcgagcagacgcgcgcgttgccggaggcccgccacgatgtgctgcgc
catgcggcggactgggtcagccgccgcttcgcgggtgaacaggcgcagcgcgcgcagatg
agtttcgatgccttgctggaccagctggacgccgcgctggccggtcccagcggcgccgcg
ctggccgagacgctgcgccggcaatttcccgtcgccctgatcgacgaattccaggatacc
gatcccgtccagtaccgcatcttcgacgccgtctatcgtgtcgcggacaacgacaagggc
agcgcgctgatcctgatcggcgatcccaagcaggcgatctacggtttccgcggcgcggac
atcttcacctatctgcgcgcgcgcgcggcggtggccggccgcctgtacgtcctgggcagg
aacttccgttccagcgtgccgatggtgcgcgccgtcaatcattgcttcctggcggccgag
cgccggccggagggcgaaggggccttcctgttccgccgccgcgacgccaatccggtcccc
ttcattccggtgcaggccaacgaccgtcccgatcgcctggtggtcgccggcaccgccacg
ccggccctgacgatgtggtggctgccgcgggcggaagacggcaagcccatgggcgcgggc
gcctatgtcgagaccatggccgatgcctgcgcgggtgaaatcgcgcgtctgttgaccttg
agccagcaaggaagcgcgggattcgcgccgcgcgacgcggtgccggcgtcggcctcgccc
gaagggccggcggccctcaggcaagcgcccgggcccgcggcaacgccgctatcgacggcc
atcctggcgcccctgcgtcccgccgatatcgccgtgctggtcgatacgggccgccaggcg
cgggccgtgcggcgcgcgctgtcgcggcgcggcgtgcgcagcgtgtacctgtccgagcgg
cagtccgtctttgccagcccgcaggctggcgagatcgaattctggctgcgcgcctgcgcg
gagcccgacgatggccgggccctgcgcgcggccctggccacgccgacgctgggcgtgcca
tggcaggagctggaccgtgtcggccaggacgaactggaatgggaggcgcgggtccagcaa
ttccgcggctacgcgcgctgctggcgcgaaaaaggcgtgctgcccatgctgcggcgcctg
ctggacgacttcggcgtgccggcccgccagttgtccgccggcgaggatcccggccaggcc
gccggcgatggcgaacgcgtaatgaccgacatcctgcacatcgccgagctgttgcagcag
gccagtacgcagatcgacggcgagcacgcgctgctgcgccacctggcggaaatgcgccac
gccgctgcgcagggcgaagagaacgacgccctgaccatacgcctggaaagcgatgccgac
ctggtgcgcgtcatcaccgtgcacaagtccaagggcctggagtacccgctggtgttcctg
ccctacgccgccgcgttccgccccgtccggccggacgcggtgccgctttcctggcacgac
gaagatggcgagctcaaggtgtcgctggtgcccgacgcgcacggccatgcccgcgccgac
cgcgagcgcctgggcgaggacttgcgcaagctgtacgtggcgctcacgcgcgcccgctat
gccacctgggtaggcgtggcgccgcttgccgatttgcaggccagcgccctcggctatctc
atcggcaaggggcaggccggccaggatgaaccgcttgccgatgtcctggaagcgtggcgc
gacggccatgccgacatcgcgctgcgcgaagcgccggcgcccggcgaaatccgctaccgg
gccgatgcggtgggccgcgccgccccggggcccgcgggcggcgcgcggacgatgcgccgt
acggtgcgcgatccctggtgggtcgccagttattcgtcgctgcgcaccgcgcgggacggc
gccatggaggccgagcccgaaacggcgcgagaggacgtcttcctggaagcggccgaatcc
gacaacccagccagcgccgccggcgatggatccgtcgacacgcgcggcatggcggtgcga
tccccgcccggcacggtgccatccgcggcgcgcgacgcccggggtgccctgcacgccttt
ccggcgggcgcccaggcgggcaccttcttccacgagctgctggaatgggccgcggcgcaa
ggcttcgcaaccgtcgccggccagccggaggcggcgcgcctggccgtggcgcgcctatgc
gaggtgcgcaactggtccgattggaccgagcccttgacggcctggctgctggacaccgtc
gcgcgtcccatggccttgcccggcatgcccggccaggcggtgccgccggtggcgctggcg
ggcgtgggcgggtatatcgcggaaatggaattctggctgggtgccgacaacgtcgacgtg
acgcggctggaccgcatcgtgcgcgcgcacacccttgaacaggcgccccgccccgcgctg
gagcccgggcgcatccacggcatgctcaagggcttcatcgatctggtgttcgagcaccag
ggccgctactacgtcctggactacaagtccaaccggctgggcgatgacgatagcgcctac
acgcaggcggcgatgcgccaggccatgctgggccatcgctacgaacttcaatacgcgctg
tatctgttcgccctgcatcgcctgctgcggtcgcgcctgcccgactacgactatgaccgc
cacgtcggcggcgcggcctatgttttcctgcgcggcacgcgggcgccgcaaggcggcgtg
ttcgtcgaccgtccgcccgccgcgatggtgcaggcgctggaccggctgttcgccgcggcg
ccggcgcgcgaggaggctgcctga
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