KEGG   Bordetella bronchialis: BAU06_04115
Entry
BAU06_04115       CDS       T04591                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bbro  Bordetella bronchialis
Pathway
bbro02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bbro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BAU06_04115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbro03021]
    BAU06_04115
Transcription machinery [BR:bbro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BAU06_04115
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 PhyR_sigma-like GerE HTH_24 HTH_7 KorB HTH_29 HTH_11 HTH_20 TPR_4
Other DBs
NCBI-ProteinID: ANN65590
UniProt: A0A193FDH2
LinkDB
Position
937861..938382
AA seq 173 aa
MGTSGYFFPTTVESLYSDHHSWLKGWLQRRLGDADQAADLAHDTFIRLLSSDRVPTTLDE
PRAFLTTVAQRVVSNHWRREKLEKAYLEALAQVPRELAWSPEARAIVLETLVELDRLLDG
LPAIVRRAFLLSQLDGQTHAQIADALEISVPTVKRYIVKALQRCFFADLSFTG
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgggtacctcgggatacttttttcccactacggtggaatcgctctacagcgaccaccat
tcctggctgaagggatggctgcagcggcgcctgggggacgcggaccaggcggccgacctg
gcgcacgatacctttatccgcctgctcagcagcgaccgcgtgccaacgacgctggacgag
cctcgcgccttcctgaccaccgtggcgcagcgggtggtgtccaaccactggcgccgcgaa
aagctggaaaaagcctatctggaagccctggcccaggtgccgcgggaactggcatggtcg
cccgaggcccgcgccatcgtgctcgaaacgctggtcgagctggacaggctgctggacggc
ctgccggccatcgtgcgccgggccttcctgctgtcccagctggacggccagactcatgcg
cagatcgccgatgcgctggagatctccgtgcccaccgtcaagcgctacatcgtcaaggcc
ttgcagcgctgctttttcgccgacctgtctttcaccggatga

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