Bordetella bronchialis: BAU06_16940
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Entry
BAU06_16940 CDS
T04591
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbro
Bordetella bronchialis
Pathway
bbro03030
DNA replication
bbro03430
Mismatch repair
bbro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAU06_16940
03430 Mismatch repair
BAU06_16940
03440 Homologous recombination
BAU06_16940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbro03032
]
BAU06_16940
03400 DNA repair and recombination proteins [BR:
bbro03400
]
BAU06_16940
Enzymes [BR:
bbro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAU06_16940
DNA replication proteins [BR:
bbro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAU06_16940
DNA repair and recombination proteins [BR:
bbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAU06_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
ANN67758
UniProt:
A0A193FKJ5
LinkDB
All DBs
Position
complement(3836409..3839906)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSEEAVIAPSPFVHLRVHSEFSVVDGTVRIPDLVKRAAKLGQPAVALTDLSNLFGLIKFY
KAARGAGIKPVAGCDVWVSNDEDRDKPYRLLLLVRDRQGYLDLCELLTRAYLTNQHKGRA
EVRREWLLQAGGLILLSGGRAGDVGQALETGNAAQAQALARQWAAAFPDAYYIELQRAGM
DGDEAYVQAALRLAAECGLPVVATHPIQFLDKHEFQAHEARVCIAEGEILANPRRVRRFT
PEQYMLDSQEMARRFADVPSALANTVEIARRCNLTLVLGKPRLPNFPTPDGVTLDDYLVQ
LSEQGLEKRLEFLFPNEEERNAKRDAYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNN
GVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERV
IDYVKEKYGREAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPADPWTLE
RALKDEPAFKERYEQEEEVRGLVDLAQPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQP
GQENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDIMAVPLDD
PAAYKILTDANTTAVFQLESRGMKELLKKLRPSTFEDIIAMLALYRPGPLESGMVDDFVN
RKHGRAPVDYFHPDLEGTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPE
EMAKHRELFQKGAEAKGHDPNLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAYH
PAEFLAATLSSDMDDTDKVQTFWRDATDNGVEVLPPDVNASGYRFEPVADARTAKGLPPR
TMRYGLGAVKGTGQSAVEDIIRARQEGGPFRDLFDFCRRVDKHTVNRRTIEALIKAGAFD
GIEPNRAALLASVPTAMEAAEQAARSANQVSLFGDDASDVVASELAKVPPWNLHTRLTEE
KSALGYYFSGHLFDAWRDEVRRIVPMTLARLEPQREPQWMCGVLSGVRAMMTRRGKMVFA
VLDDGTAQVEISIFNELYEKHRNRLREDQLLIVHGKVSNDEYSGGMRIVAESLFDLQLAR
EARARSLRIRLNGNADAEHLRKLLNPYRAEPENGVPGTPVEVIYTRGNFLCTVRLGEDWR
VRMADALLERLNEWTRPEGVEISYS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaagccgtcatcgccccgtccccctttgtccacctgcgcgtccattccgag
ttttcggtggtggacggcacggtccgtattcccgatctggtcaagcgcgccgccaagctg
ggccagcccgccgtcgccttgacggatctgtccaatctgttcggcctgatcaagttctac
aaggccgcgcgcggcgccggcatcaagccggtggccggctgcgatgtgtgggtcagcaac
gacgaggaccgcgacaagccctaccgcctgctgctgctggtgcgggaccgccagggctac
ctggacctgtgcgagctgctgacgcgcgcctacctgaccaaccagcacaagggccgggcg
gaggtgcgccgcgaatggctgttgcaggccggcggcctgatcctgttgtcgggcggccgc
gccggcgatgtcgggcaggcgctggagaccggcaacgccgcgcaggcacaggcgctggcg
cgccagtgggcggcggcctttcccgatgcctattacatcgagctgcagcgcgccggcatg
gacggcgacgaggcctacgtccaggccgcgctgcggctggccgcggagtgcggcctgcct
gtcgtggccacgcatcccatccaattcctggacaagcacgaattccaggcgcacgaggcg
cgggtctgcatcgcggagggcgagatcctggccaacccgcgccgcgtccgccgtttcacg
cccgagcagtacatgctggatagccaggaaatggcgcggcgcttcgccgacgtgccctcg
gccctggccaatacggtggaaatcgcccgccgctgcaacctgacgctggtgctgggcaag
ccgcggctgccgaatttccccactcccgacggcgtcacgctggacgactacctggtacag
ctgtccgaacagggcctggaaaagcgcctggagttcctctttcccaacgaagaagaacgc
aacgccaagcgcgatgcctactacgaacgcctgcgctgggaatgcaagaccatcatccag
atgggcttcccgggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaac
ggcgtgccggtcgggccgggccggggttcgggcgccggttcgctggtggcatacgcgctg
ggcattaccgacctggacccgattcgctacgacttgctgttcgaacgcttcctgaatccg
gagcgggtgtccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgggtc
atcgactacgtcaaggaaaaatacggccgcgaggcggtcagccagatcgccaccttcggc
acgctgggggccaaggcggtggtgcgcgacgccggccgcgtgctggatatgccgtatatg
ttctgcgacggcttgtccaagctgatcccgttcaacccggcggatccctggacgctggaa
cgcgcgctcaaggacgaacccgccttcaaggaacgctacgagcaggaagaggaagtccgc
ggcctggtcgacctggcgcaaccgctggaagggctgacccgcaacatcggcatgcacgcc
ggcggcgtgctgatcgcgcccggcaagctgaccgatttctgcccgctgtactgccagccc
ggccaggagaacagcgcggtatcgcagttcgacaaggacgacgtggaagcggccggcctg
gtcaagttcgacttcctgggcctgcgcaacctgaccatcctggactgggcggtgcgctat
gtccggcagttcaacgaggacaagcgcgatttcgacatcatggcggtgccgctggacgac
cctgccgcctataagatcctgaccgacgccaataccaccgcggtattccagctggaatcg
cgcggcatgaaggagctgctgaagaaactgcggcccagcaccttcgaagacatcatcgcc
atgctggcgctctaccgtccgggcccgctggaatccggcatggtggacgacttcgtcaac
cgcaagcacgggcgggcgccggtcgattacttccatcccgacctggaaggcaccctcaag
agcacctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggc
ggctactcgctgggcggcgccgacctgttgcggcgcgccatgggcaagaaaaagcccgag
gaaatggccaagcaccgggagttgttccagaaaggcgccgaagccaagggccacgacccc
aacctggcggtcaagctgttcgacctgatggagaagttcgccggctacggcttcaacaag
tcgcactcggccgcctacgcgctgatcgcctaccagaccgcgtggctcaaggcctatcat
cccgccgaattcctggccgccaccctgtcgtccgacatggacgataccgacaaggtgcag
accttctggcgcgatgccacggataacggcgtggaagtcctgccgcccgatgtcaatgcc
tccggctaccgcttcgagccggtggccgacgcccgcaccgccaagggcctgccgccgcgc
accatgcgctacggcctgggcgcggtgaaaggcaccggccagagcgcggtcgaggacatc
atccgcgcgcgccaggaaggcgggccgttccgcgacctgttcgacttctgccgccgggtc
gacaagcacacggtgaaccgccgcaccatcgaggccctgatcaaggccggcgccttcgac
ggcatcgagccgaatcgcgcggcgctgctggcctcggtgcccaccgccatggaggccgcc
gagcaggccgcgcgcagcgccaaccaggtttcgctgttcggcgacgacgccagcgacgtg
gtggccagcgaactggccaaggtgccgccctggaacctgcatacccgcctgacggaagaa
aaatccgcgctgggctattacttcagcgggcatctgttcgacgcctggcgcgacgaggtc
cgccgcatcgtccccatgacgctggcccggctggagccgcagcgggaaccgcaatggatg
tgcggcgtgctgtcgggcgtgcgcgccatgatgacccgccgcggcaagatggtgttcgcg
gtgctggacgacggcacggcgcaggtggaaatttccatcttcaacgaactctacgaaaaa
caccgcaaccgcttgcgcgaggaccagctgctcatcgtgcacggcaaggtcagcaacgac
gagtattccggcggcatgcgcatcgtggccgagtcgctgttcgacctgcagctggcgcgc
gaagcccgcgcgcgctcgctgcgcatccgcctgaacggcaacgccgacgcggaacacctg
cgcaagctgctcaatccctaccgcgccgaaccggaaaacggcgtgcccggcacgcccgtg
gaggtcatctacacccgcggcaatttcctgtgcacggtccggctgggcgaagactggcgg
gtacgcatggccgacgcgctgctggagcggctcaatgaatggacacgcccggaaggcgtg
gagatctcctactcatga
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integrated database retrieval system
