Bordetella bronchialis: BAU06_19945
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Entry
BAU06_19945 CDS
T04591
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bbro
Bordetella bronchialis
Pathway
bbro00040
Pentose and glucuronate interconversions
bbro01100
Metabolic pathways
bbro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bbro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BAU06_19945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BAU06_19945
Enzymes [BR:
bbro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BAU06_19945
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ANN68265
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Position
complement(4526932..4528125)
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AA seq
397 aa
AA seq
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MKRWLAVLAMLYCGLAAATESCRVPDLSCPAVSSLLQQREGYGAKATGGLGGRFVDVTSD
KDSGPGTLRAALSHARAQGPAWIRFASDMTIVLDKQLRVPSNVTIDGRGRQVTLIDDGLG
VYGSKNVILTHLTIDGRFGRLTQAVNVANGSRDVWVDHLDLSRFSDRLLNVKNGSTDVTI
SWTKFHDSDKVMLLNNITSKNLFKNYDRDSIARVTLHHNYFLNTVQRNPRAQFGTFHLFN
NLLENWDFYGMSFSLEARALVEGNIFSNVSQRKCVEPEFFPTVEGVKVNYCRYIPEAPKR
SALVNGESDRRNYEKSKAQYGYGRDFKASLRLKDNLYLGDAKPVLEDYRTESVPTPPYCY
GYEHPTPELAEKIRRLAGNTREETPLAAPRGGSACPG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctggctggcagtcctggcgatgttgtattgcggcctggcggccgcgaccgaa
tcatgccgtgtgccggacctgagctgtccggctgtttcgtccctgctgcagcaacgcgaa
gggtatggcgcgaaggcaacgggcggcctgggagggcggttcgtggatgtcacgtccgac
aaggactcgggccccggcaccttgcgcgccgcgctgtcgcatgcgcgcgcgcaaggcccc
gcctggatccgcttcgcgtccgacatgaccatcgtgctggacaagcagcttcgcgtgccg
tcgaacgtcaccatcgatgggcggggaaggcaggtcaccctgatcgatgacgggctgggc
gtgtatggcagcaagaacgtcatcctgacgcacctgacgatagacgggcgcttcggcagg
ctgacacaggcggtgaatgtggccaacggcagccgcgatgtgtgggtcgatcacctggat
ctttcgcggttctccgatcgcctgctcaatgtgaagaacggttcgaccgacgtgacgata
tcgtggacgaaattccacgactccgacaaggtcatgctgctgaacaacatcacgtcgaag
aacctgttcaagaactacgaccgggattcgatcgcgcgggtgacgctgcaccacaattat
ttcctgaacacggtgcagcgcaatccgcgcgcgcaattcggtaccttccacctgttcaac
aacctgctggagaactgggatttctacgggatgagtttcagcctggaggcgcgcgcgctg
gtcgagggcaatatcttcagcaatgtctcgcagcgcaaatgcgtggagccggagttcttt
cccacggtggaaggcgtcaaggtgaactactgccgttatatcccggaggcgcccaagcga
agcgcgctggtcaacggcgaatccgaccggcgcaactacgagaaatccaaggcccagtac
ggctatggcagggatttcaaggcctcgctgcgcttgaaggacaatctgtacctgggcgat
gccaagccggtactggaagactaccgtaccgagtcggtgccgacgccgccgtactgctac
ggctatgagcatcccacgcccgagctggcggagaagatccgcaggctggcgggcaatacc
cgggaagaaaccccgctggccgcgccgcgcggcggatcggcttgccccggttga
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