Bifidobacterium breve S27: BS27_0648
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Entry
BS27_0648 CDS
T03123
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbrs
Bifidobacterium breve S27
Pathway
bbrs00300
Lysine biosynthesis
bbrs00470
D-Amino acid metabolism
bbrs01100
Metabolic pathways
bbrs01110
Biosynthesis of secondary metabolites
bbrs01120
Microbial metabolism in diverse environments
bbrs01230
Biosynthesis of amino acids
Module
bbrs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbrs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BS27_0648 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BS27_0648 (dapF)
Enzymes [BR:
bbrs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BS27_0648 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AHJ24499
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All DBs
Position
803245..804144
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AA seq
299 aa
AA seq
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MSLPQRVTKTHATGNDFVVYLDKTGDFEPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSD
LSDEQIMAVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGTADSTEPFRLGTRA
GVKILTPRGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAV
IEDAFSTLPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGGATMRVNERGCGE
TLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVTDEDVKLTGSATLVADIDLLRS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttccgcaacgagtaactaagacacacgcaaccggcaatgatttcgtggtgtac
ctcgacaaaaccggcgatttcgagcccactgccgatgagatacggttcctgtgcgaccgt
catttcggcatcggcggcgatggactgattcgcctgaccaagcctgagttcgtgtctgat
ctgagcgatgagcaaatcatggctgtgcaggcaggtgacgctgaatggttcatggactat
cgcaatgcagacgggtcgttggctgagatgtgcggcaacggcacacgcgccatcacttta
ttcgcccagcgtgagggcacggctgactccaccgagccgttccgccttggaacccgagcc
ggcgtcaagattctgacccctcgtggcaacgtgaagccgtatggtgccaatgtgttccag
gtggaaatgggggagtggaaaatcggcgagaccgacgcctatgaagtcactattcccggc
aacgatggctcggcacgtggcacgttcgtcgacatgggcaacccgcatgtggtggcggtg
attgaagatgccttctccacgctgccagtggtcgaggatctggatttggtcaccaagccg
gtggtcaacccaactatcgaatccgatcagaacgtggaattcgtgcgtattgatgatatc
gaccacaacaccgcagtgggtggggcgacgatgcgtgtcaacgaacgaggctgcggagag
accctctcctgcggtacgggcttgtgcgccacaggcattgtgctacgcgccaagaccggc
atctcacactgggacatcaccgtgcgcggcggcactctgcgagtggacgtgaccgacgag
gacgtcaaactcaccggctcggccacgctggttgccgatatcgatttgctccgttcctga
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