Bifidobacterium breve UCC2003: Bbr_0089
Help
Entry
Bbr_0089 CDS
T02534
Symbol
degP
Name
(GenBank) trypsin-like serine protease
KO
K08372
putative serine protease PepD [EC:3.4.21.-]
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bbr_0089 (degP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbru01002
]
Bbr_0089 (degP)
Peptidases and inhibitors [BR:
bbru01002
]
Serine peptidases
Family S1: chymotrypsin family
Bbr_0089 (degP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ_6
PDZ
Motif
Other DBs
NCBI-ProteinID:
ABE94801
LinkDB
All DBs
Position
127555..129510
Genome browser
AA seq
651 aa
AA seq
DB search
MADEFNPQGVDQTPQNNENPAPNGNETEPQTSAQNAAEGDVATNPSHEDGSPTQQMLSTQ
NDAPTATTEPIPDYAAAKGESTVVSSAPASTPAADTQSATPLYRPAPEFGAYGPTPTQPE
QSASNTAQQGAQPTQQFPYGQAFSQQPQGQRNPYFTNNQQQGNSNPFNPQPQQPQNNGNP
FATPNGQRQGGLFGFGSGAGTPNGQNPQGPQGPAQPNRPGLSKTANAIVVAVVAALVAAA
LCLGLGYAAITNGWVTVPTSSSLSSVTSNKSGSGSATAKTGEAPDWQTVASGVSGSVVSI
QTAMANGTAKGSGAIIDAEGHIITNNHVISGAQQIQVTLANGNIYSAQLVGTDTTTDLAV
IKLDNPPSGLKAVEFADSDKLAVGENVMAIGNPLGYDDTATTGIVSALNRPVTVTDDNNN
EIVTNAVQIDAAINPGNSGGPTFNAAGQVIGINSSIASTATSSDSAGSIGIGFAIPSNLV
KRVADEIIKDGSVKHVALGVVIKSDTVEADGVTRGGATITKSSATGSAVVSGGPADKAGL
KEGDTIVAFNGNAVNNNYSLLGFVRAAALGDKATLTIVRDGKTMDVDVTLDQEESSVNGS
SSSNSNGNNQNNQNNQNNQNGNGRNGYGNGNGNNDGGTGDGGGFSDPFGLW
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaatttaacccgcagggcgtcgaccagaccccgcagaacaacgaaaatccc
gccccaaacggcaacgagactgagcctcagacttcggctcaaaacgccgccgaaggcgat
gtcgcaaccaacccatcccacgaggacggcagcccaacccagcagatgctttccacgcaa
aacgatgccccgaccgctaccaccgagcccattccggactacgccgcggccaagggcgag
agcaccgtggtctccagcgctccggcctcaactccggctgcagacacgcagtccgcaact
ccgctctaccgcccggctccagagttcggcgcgtatggcccgactccgacgcagcccgag
caatccgcgtcaaacaccgctcagcaaggcgcccagcccacgcagcagttcccgtatggt
caggccttttcgcagcagccacaaggccagcgcaacccttacttcaccaacaaccagcag
cagggcaacagcaacccgttcaacccgcagccgcagcagccgcagaacaatggcaacccg
ttcgctactccaaacggccagcgtcagggtgggctgtttggcttcggctctggcgccggc
acgccgaacggccagaatccgcagggcccgcaaggcccggcccaacccaatagacctggt
ctgtccaagacggcaaacgccatcgtcgttgctgtggtcgccgcgctggtcgctgcggct
ttgtgcctcggccttggctacgcggccatcactaacggctgggtgactgtcccgacctcc
agctcgctctcgagcgtcacttcaaacaagtccggctccggctctgccactgccaagact
ggcgaagcccccgattggcagacagttgctagcggcgtctccggctctgtggtctccatt
cagaccgcaatggccaacggcactgccaagggatccggtgcaatcattgatgctgagggc
cacatcatcaccaataaccacgtgatttccggggctcagcagattcaggtgacgcttgct
aacggcaacatctattccgctcagctcgtcggcaccgacaccaccaccgaccttgccgtg
atcaagctcgacaacccgccgagcggtctcaaggccgtcgaattcgccgattccgacaag
ctcgccgtcggcgagaacgtgatggctatcggtaacccgctcggctatgacgacaccgcc
accaccggcatcgtctccgccctgaaccgcccggtgaccgtgaccgatgacaacaataac
gagatcgtcaccaacgccgtccagatcgacgcggccatcaaccccggtaactcgggtggc
ccgaccttcaacgcggccggccaggtaatcggcatcaactcctcgattgcctctaccgca
acttcctccgactccgccggctcgatcggcatcggcttcgcgattccgtctaacctcgtc
aagcgcgttgccgatgagatcatcaaggatggctcggttaagcacgtcgcccttggcgtg
gtcatcaagtccgacacggttgaagccgacggtgtgacccgcggcggcgcgaccatcacc
aagtcgagcgccactggttccgcagtcgtctccggcggcccggccgacaaggctggcctg
aaggaaggcgacaccatcgtggccttcaacggtaacgcggtcaacaacaactactcgttg
ctgggcttcgtgcgcgccgcagctctcggcgataaagcgacgctgaccatcgtgcgcgac
ggtaagaccatggacgtcgacgtcacgctcgaccaagaggaatcttccgtaaacggttcg
tccagctcgaactcgaacggcaacaaccaaaataaccagaacaaccaaaataaccagaac
ggcaacggccggaatggttacggcaatggcaacggcaacaacgatggcggcaccggtgat
ggcggcggcttctccgacccgttcggtctgtggtaa
DBGET
integrated database retrieval system
