Bifidobacterium breve UCC2003: Bbr_0282
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Entry
Bbr_0282 CDS
T02534
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
bbru
Bifidobacterium breve UCC2003
Pathway
bbru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bbr_0282 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbru03021
]
Bbr_0282 (rho)
03019 Messenger RNA biogenesis [BR:
bbru03019
]
Bbr_0282 (rho)
Transcription machinery [BR:
bbru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bbr_0282 (rho)
Messenger RNA biogenesis [BR:
bbru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bbr_0282 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
SAP
PIP5K
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABE94988
LinkDB
All DBs
Position
387003..388973
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AA seq
656 aa
AA seq
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MANSQNLEDMKLPELKELAKQMGLRGTSTMRKPELLATLQAARSGGEPPAGVTVRTPKAD
KAVTKAAKAEPVVEETVALAEPQLDLSALAEEPKAAEPRRVRRKAADEATEEPRDARHRR
DDERTGRKPRKQADEAGDLLASLDLGETTAPERRRNRRDDTEAPLIRRVHDEDQPRRRRR
PADSSDETVRDLDDILATLPTQKHDEPSDDGEQSEDREFSRRSRNRDRDRDNRNDRNDRR
NRRMRGRDRGENAGEDDRRFDDRENRNDRREEPQEDLVPVAGIVDVLDSYAFVRTSGYLP
GPNDVYVSMGQVKKYGLRKGDAVHGSIRAPRENDRRNQRQKFVPLQSIDSINGQSVEDAL
NRPQFSKLTPLYPQERLKQETAPNKLTGRIMDIVSPIGKGQRGLIVSPPKAGKTITLQNI
ANAIAANNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTTVAELAIERAK
RLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGG
SLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAIDINASGTRREELI
TDPQELPIIYRLRRLLGGMEPEQAYQTLVPRLKKTATNRDFLAAIVQQQSGAVNGN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagccagaatcttgaggatatgaagctgcctgagctcaaggagctcgccaag
caaatgggtctgagaggcacgtctaccatgcgcaagcccgaactgctcgccaccttgcag
gccgcccgcagtggcggtgagccgccggctggcgtcactgtgcgcactcccaaggccgac
aaggccgtcaccaaggcagccaaggctgagccggtcgtcgaagagaccgttgctctggcg
gaaccgcagcttgatctatccgcacttgccgaagagcccaaggccgcggagccccgtcgt
gtgcgccgtaaggcagccgatgaggccactgaagaaccgcgcgatgcccgtcatcgccgc
gatgatgaacgaaccggccgcaagccgcgcaagcaggccgatgaggccggcgatctgctc
gcctccctcgatttgggcgagaccaccgctcccgagcgccgccgcaaccgtcgtgatgac
accgaagctccgctcattcgccgtgtgcatgatgaggatcagccgcgtcgccgtcgccgt
cctgcggacagcagcgacgagaccgtgcgcgatttggatgacattctggccacgctgccc
acgcagaagcacgacgaaccttccgacgatggtgaacagagcgaagaccgcgagttcagc
cgtcgcagccgtaaccgtgaccgagatcgcgacaaccgcaatgatcgcaatgaccgccgc
aaccgccgtatgcgtggtcgtgaccgtggcgaaaacgccggcgaggacgatcgtcgtttc
gatgatcgcgagaaccgcaatgaccgccgcgaggagccgcaggaagacctggtaccggtg
gccggtatcgtcgatgtgctcgattcctatgcgttcgtgcgtacgtccggctatctgcct
ggcccgaacgacgtgtacgtctccatgggccaggtcaagaagtatggcctgcgcaagggc
gatgccgtgcacggttccattcgagccccgcgcgagaacgatcgccgcaaccagcgtcag
aagttcgtgccgctgcagtccattgactcgattaacggccagagcgtcgaggacgcactg
aaccgtccgcagttctccaaactcaccccgctctacccgcaggagcgcctcaagcaggag
accgcgccgaacaagctcactggccgcatcatggatatcgtttccccgatcggcaagggc
cagcgtggtctgatcgtctccccgcctaaggccggtaaaaccatcaccctgcagaacatc
gccaatgccattgccgccaacaaccccgaggttcacctgatggtggtgctcgtggacgag
cgacctgaagaggtcaccgatatggagcgcacggttcagggtgaggtcatctcctccact
ttcgatcgtcctgcttccgaccacaccaccgttgctgagctggccatcgagcgcgccaag
cgtcttgtggagctcggccaggatgttgtagtgctgctcgattccatgacccgtctggcc
cgtgcctacaacatcgcggctccggcttccggtcgtatcctgtccggtggtgtggatgcc
caggcgctctacccgccgaagaagttctttggtgcggcccgcaacatcgaaaacggcggc
tccctgaccatcatctcctcggcgctggtggaaaccggctccaagatggacgaggtgatt
ttcgaggagttcaagggtaccggcaacatggagcttcgcctctcccgagagctggcggac
aagcgcttgttcccggccatcgacatcaacgcctccggcacccgccgcgaagaactcatc
accgacccgcaggagctgccgattatctatcgtctgcgccgactgctgggtggcatggag
cctgagcaggcctaccagaccctggtgccgcgtctcaagaagaccgccacgaaccgcgac
ttcctggctgccatcgtgcagcagcagagcggagccgtgaacggcaactga
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